Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_39465 |
Symbol | |
ID | 4851838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | - |
Start bp | 2966171 |
End bp | 2968408 |
Gene Length | 2238 bp |
Protein Length | 745 aa |
Translation table | |
GC content | 43% |
IMG OID | 640393546 |
Product | predicted protein |
Protein accession | XP_001387133 |
Protein GI | 126275751 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0480] Translation elongation factors (GTPases) |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00484] translation elongation factor EF-G |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.000000268657 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGAGTGGTA CCGTGAGGAG GTTCCATTTT TCCAGACCTG TTTTCAATGG TGTCGAGGCT GTCAAGCTCC CCAGCACTTA CGAAGAGGAA AAGGTAATTA TCGACGAGAT TAACAAAGAG TTGCCTCATG CTGACTTGGA TGCTTCAAAG AGAATGAGAA ATATCGGTAT TTCGGCCCAT ATCGACTCTG GAAAGACTAC CTTCACTGAA CGTGTCTTAT TCTATACCGG TAGAATCAAG GCTATTCATG AAGTCAGAGG TCGTGATGCT GTTGGAGCTA AAATGGATCA CATGGACTTG GAGAGAGAAA AAGGAATTAC CATCCAATCT GCTGCTACAT ACTGTTCGTG GGACAAGGAA GACACAGCTT ATCATTTCAA CTTGATTGAT ACCCCTGGCC ATATTGATTT CACAATTGAA GTCGAAAGAG CGTTGAGAGT TTTGGATGGT GCTGTGTTGG TTGTTTGTGC AGTTTCCGGT GTCCAGTCTC AGACCGTTAC TGTGGATCGT CAAATGCGTC GTTACAATGT TCCTAGGGTC ACATTCATCA ACAAGATGGA CCGTATGGGT GCTGATCCTT TCAGAGCCAT TGAACAGATT AACTTGAAAT TGAAGACACC TGCTGCTGCT ATCCAAGTTC CTATTGGTGC TGAATCTGAA TTGAAAGGTG TAGTCAACAT CATCGACCGT GTAGCCTTGT ACAACGAAGG TGCCCAGGGT GAGACTATAA GATCTGCCGA AGTGCCAGAA GAGTTGAAGG AATTGGTTGA AGAAAAGAGA GCTTTATTGA TTGAGACTTT GGCTGACGTT GACGATGAAA TGGCTGATAT CTATTTGGAA GGTGAAGAAC CAACTGTGGA ACAAATCAAA GGAGCTATTA GAAGAGCCAC TATCGGCAGA AAATTCACTC CTGTCTTAAT GGGTTCTGCT TTGGCCAACA AAGGTATTCA ACCAGTATTA GATGCTGTTG TTGACTACTT ACCGCAACCA AATGAAATCT TGAATACTGG TTTGGAAGTG GCTAAATCGG GTGAAGAAAA GCCAATTAAC TTGCTCCCAT CCAGTTCTGC TCCCTTCGTC GGCTTAGCCT TCAAATTGGA AGAAGGTCAA TATGGTCAAT TGACTTATAT TAGAGTCTAC CAAGGTAAGT TGAAGAAGGG TTCCTATATG ACTCACGTCA AGACCGGTAA GAAGGTCAAG GTCGCCAGAT TGGTGAGAAT GCACTCCAAC GATATGGAAG ACGTTAACGA AGTTGGTCCC GGTGAAATCT GCGCCACATT CGGTATTGAC TGTGCTTCTG GTGATACATT TATGGGTGCC AACAGTGATC AGCTTATTGC CATGAGTTCC ATGTTTGTTC CGGAAGCAGT TATTTCATTG TCCATTGCTC CAAAGTCAAA GGATAATGGA GCCTTCTCCA AGGCTATGAA CAGATTCCAG AAGGAAGATC CTACTTTCAG AGTCAAGTTC GACCCAGAAT CCAAAGAAAC CATTATTTCC GGTATGGGTG AGTTGCACTT GGAAATCTAC GTAGAAAGAA TCAAGCGTGA ATACGGTGTA GAATGTATTA CCGGTAAGCC ACAGGTTTCC TACAGAGAAT CTATTACTGC TCCTACCACT TTCGACTACA CCCACAAGAA ACAATCTGGT GGTTCTGGTC AATACGGTAG AGTTATGGGT GAATTCTCTC CTCTTGAAGG TGACAACAAG TTCTCGCAAC ATATTGTTGG TGGCAAGATT CCTGAGAAGT TCTTGTTTGC TTGTTCTAAG GGTTTTGAAG ACTGTTTAGA AAAGGGTCCA TTAATTGGTC ACAAGGTCTT GGGTGTCCAC ATGCATATCA ACGATGGTCA AACTCACGTC GTCGATTCTT CTGAATTGTC GTTCAGAACT GCTACTCAAG GTGCCTTCAA GCAAGCTTTC TTGGAAGCTC AGCCCGTCAT TTTGGAACCT ATTATGTCTG TTGAAATCAG TGCTCCAAAT GAGTTCCAAG GTTCAGTTGT AGGCTTAGTC AACAAGTTGG GAGGCATGAT CTTGGAAACT GTCAACGGTC AAGATGAATT TACTGTCACT GCTGAATGTT CCTTGAACTC CATGTTCGGC TTCTCCACTT CATTGAGAGC TTGTACTCAA GGTAAGGGTG AATTCTCTTT GGAATTCTGT AAATACAGTC AAACCTCTCC ACAGTTGCAA AGAGAGTTAA TTGCCGAGTA CCAAAAGGCT TTGGCTGCTA AGAAATAG
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Protein sequence | MSGTVRRFHF SRPVFNGVEA VKLPSTYEEE KVIIDEINKE LPHADLDASK RMRNIGISAH IDSGKTTFTE RVLFYTGRIK AIHEVRGRDA VGAKMDHMDL EREKGITIQS AATYCSWDKE DTAYHFNLID TPGHIDFTIE VERALRVLDG AVLVVCAVSG VQSQTVTVDR QMRRYNVPRV TFINKMDRMG ADPFRAIEQI NLKLKTPAAA IQVPIGAESE LKGVVNIIDR VALYNEGAQG ETIRSAEVPE ELKELVEEKR ALLIETLADV DDEMADIYLE GEEPTVEQIK GAIRRATIGR KFTPVLMGSA LANKGIQPVL DAVVDYLPQP NEILNTGLEV AKSGEEKPIN LLPSSSAPFV GLAFKLEEGQ YGQLTYIRVY QGKLKKGSYM THVKTGKKVK VARLVRMHSN DMEDVNEVGP GEICATFGID CASGDTFMGA NSDQLIAMSS MFVPEAVISL SIAPKSKDNG AFSKAMNRFQ KEDPTFRVKF DPESKETIIS GMGELHLEIY VERIKREYGV ECITGKPQVS YRESITAPTT FDYTHKKQSG GSGQYGRVMG EFSPLEGDNK FSQHIVGGKI PEKFLFACSK GFEDCLEKGP LIGHKVLGVH MHINDGQTHV VDSSELSFRT ATQGAFKQAF LEAQPVILEP IMSVEISAPN EFQGSVVGLV NKLGGMILET VNGQDEFTVT AECSLNSMFG FSTSLRACTQ GKGEFSLEFC KYSQTSPQLQ RELIAEYQKA LAAKK
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