| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_39320 |
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| Symbol | EGC3 |
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| ID | 4851776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 2798817 |
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| End bp | 2800262 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | |
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| GC content | 39% |
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| IMG OID | 640393484 |
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| Product | endoglucanase family 5 glycoside hydrolase |
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| Protein accession | XP_001387099 |
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| Protein GI | 126275568 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2730] Endoglucanase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.280438 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTGCCG GTTTCTTGAC CACTGCAGGT ACGAAGATCG TTGATGCTGA AGGAACCCCG
GTCGTCCTTA AAGGGGCAGC TTTGGGCGGG CACTTGAATA TGGAGAACTT TATTACTGGT
TATCCCGGTC ATGAAACCGA ACATAAGTTG GTCTTGGAGA AAAAAATAGG TAAAGAGAAG
TTCGACTATT TTTTCGAAAA GTTCTACGAA TATTTCTGGA CTGAGAAGGA TGCTGAATTC
TACAGAAATA AATTGGGTTT TAACTGTTTG AGAATTCCTT TCAATTATCG ACACTTCATC
GACGATAATG GTGATTTGTT CAAAATTAAG GGAAAGGGCT TTGAATTGTT GGATAGAATA
GTAGATATCT GTTCCCAGTA CGGAATCTAT ACTATTTTGG ATTTACACAC AACTCCTGGT
GGACAGAACC AAGGTTGGCA CTCTGATTCT GCTATTCACA AGTCTCTCTT TTGGGATTTC
AAGGTTTTCC AAGATTCAAT TGTTAACCTT TGGGTTGAGT TGGCCAAGCA TTACAAAGAC
AATGTCTGGG TTGCTGGTTA CAATCCATTG AACGAGCCTG CCGTTTCAGA CTCTGAAAAG
TTGGTCGACT TCTACAAAAG ATTGCACGAC GAAGTTAGAC CCATTGATCC CAACCACATT
TTCTTCCTTG ATGGAAACAC ATATGCAATG GACTTCAGGA AATTCCCTTC GCCAGAATCC
TATATTCCTA ATACAGTATA TTCAATTCAT GATTACTCTA CCTATGGTTT CCCAAATCTT
GAAGGTGCAT TATACACTGG TTCAGAAGAG GAAAAGTCAA AATTAAAATC TCAATATAAC
AGAAAGATCG AGTACCAAAG TGAATACAAA GTTCCTGTTT GGAATGGTGA GTTTGGACCC
GTTTATGCTT CAAAGGAAAG AGGTGACAAA AATCCGGAAG TAATCAACCG GGCACGGTTC
AATGTCTTGA AAGACCAATT AGAAGTCTAC AGAAAGGGAG ATCCATCAGG TGACGGCTCC
CCTATTTCGT GGTCAATTTG GTTGTACAAA GATATTGGTT TCCAAGGTTT GACTTACGTC
TCTCCCAAGT CAAAATGGTA TGAGGTATTT GGAGAATGGC TACTTAAGAA GAAGAAGTTG
GGTTTAGATA AATGGGGCAA TGACATTGAC CCGGGTTATA ATCAATTGTA CCAAAACTTG
GTAGACCATA TGGAAGCCAA TGTCCCAGAA AAGTATCATA AAGTTCTATA CCCTCATACA
TGGACAATGG AGAAATATTT GGCCCGTGTT TCTAGAGATA TGCTCTTTTC ACAATACGCT
CAACATGAAT ATGCTGATTT GTTCGTTGGA TTTTCTTTAG AAGAACTTGA CGAATTAGCT
GCTTCTTTCA AATTTGAGAA TCTAGATCAA AGAGAGGAAT TGAATCAGAT ATTGAAAGAA
TACTAG
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| Protein sequence | MSAGFLTTAG TKIVDAEGTP VVLKGAALGG HLNMENFITG YPGHETEHKL VLEKKIGKEK
FDYFFEKFYE YFWTEKDAEF YRNKLGFNCL RIPFNYRHFI DDNGDLFKIK GKGFELLDRI
VDICSQYGIY TILDLHTTPG GQNQGWHSDS AIHKSLFWDF KVFQDSIVNL WVELAKHYKD
NVWVAGYNPL NEPAVSDSEK LVDFYKRLHD EVRPIDPNHI FFLDGNTYAM DFRKFPSPES
YIPNTVYSIH DYSTYGFPNL EGALYTGSEE EKSKLKSQYN RKIEYQSEYK VPVWNGEFGP
VYASKERGDK NPEVINRARF NVLKDQLEVY RKGDPSGDGS PISWSIWLYK DIGFQGLTYV
SPKSKWYEVF GEWLLKKKKL GLDKWGNDID PGYNQLYQNL VDHMEANVPE KYHKVLYPHT
WTMEKYLARV SRDMLFSQYA QHEYADLFVG FSLEELDELA ASFKFENLDQ REELNQILKE
Y
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