Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_38885 |
Symbol | |
ID | 4851432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | + |
Start bp | 1803498 |
End bp | 1804226 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | |
GC content | 44% |
IMG OID | 640393140 |
Product | predicted protein |
Protein accession | XP_001387579 |
Protein GI | 126274560 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0638] 20S proteasome, alpha and beta subunits |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCTA CTGTTGCTTC AGAATACTCA TCGGAAATCC ACTCCGTGCC CATTGAACAT AGATTCAATC CATACTCCGA TAATGGTGGT ACCGTTTTGG GTATCGCCGG AGAAGACTTT GCTGTTTTGG CTGGAGACAC CAGACAAGTA GAAGGGTATT CGATCCAGTC ACGTTACCAG CCCAAGGTGT TCAATGTTGG GGACGACATT GTGATGACGG CCAACGGTTT TGCTGCCGAT GGTGCTGCGT TAATTGACAG ATTCAAGAAC CAATTGCAAT GGTATAAATT TGACCACGGC GGAAAGAAGT TGAATATCAA ATCTGCTGCC AGATACATCC AGCATCTTCT TTACGGAAAG AGATTCTTTC CGTATTACGT TAGCACTTTG ATAGCGGGAC TCGACGAAGA AGGTAAGGGT GCTGTTTATT CGTACGACCC CGTAGGTTCT TATGAAAGAG AACAGTGTAG AGCTGGAGGA GCTGCTGCTT CGTTGATCAT GCCCTTTTTA GATAATCAGG TTAACTTCAA GAACCAGTAT GAACCTGGAA GTGATGGCAA GAAAAAGAGA GAATTGAGAT ACTTGACGTT GGACGAAGTG TTGGAGTTGG TGCGCGATGC CTTTTCTTCA GCCACAGAAA GACATATCCA AGTAGGTGAT GGATTAGAGA TCTTGATTGT CACTAAGGAA GGTGTGAGAA CAGAGTACTT TGACTTGAAG AGAGATTAA
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Protein sequence | MNATVASEYS SEIHSVPIEH RFNPYSDNGG TVLGIAGEDF AVLAGDTRQV EGYSIQSRYQ PKVFNVGDDI VMTANGFAAD GAALIDRFKN QLQWYKFDHG GKKLNIKSAA RYIQHLLYGK RFFPYYVSTL IAGLDEEGKG AVYSYDPVGS YEREQCRAGG AAASLIMPFL DNQVNFKNQY EPGSDGKKKR ELRYLTLDEV LELVRDAFSS ATERHIQVGD GLEILIVTKE GVRTEYFDLK RD
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