Gene PICST_37188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_37188 
SymbolKTR3 
ID4841003 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp471241 
End bp472665 
Gene Length1425 bp 
Protein Length357 aa 
Translation table12 
GC content44% 
IMG OID640392318 
Productmannosyltransferase 
Protein accessionXP_001386481 
Protein GI150866773 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG5020] Mannosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.251125 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCAA TAACCTCCTA CTGGAGACTC CATGTGGTGG TATTCCTTCT TCTCATTCCC 
TTTTACGCAC TGAAATATGT ACGCTTTTCA CTTGTACCAC TAGATAAGGG AAGATACGGT
TTAAGTTTGG AGATTCAAAC ACGTAAAGGT CGCCAGGAGA CCGGAGATTC CAAGGTATTT
GAAGCTTTTA ATGGCGCTGG TGTCGCTTCC GCTATCGACG AATATGGCGA AAACTCTACT
ACTGACGTTA TTGGCACCGT GGAGAAAACT GTTCTTGATT CTGGATATTC AGACGATGCC
GGAAATGGTA AACAGCAAAC AGCGGCCTAT GACATTTTCC ACTGGAACTG GACTTCACCA
GAGCCTCTAG AATCGCTAAA AGACTTTCTC CGGAGTACTT CTTTGGTGCA TAAAGTTTCT
TCTGAAGTAC CATCTCAGAT GGTACAGATT CATAAAACCT CGTCAAAAGA TTTCCACAAT
GGACAAAGAG AAAGGGCCAC ATTTTTGATT CTTTGTCGAG ATGAAGACGT CTATGAACTT
CTAGAAACGG TTCAAAATCT CGAGGACAGA TTCAACAGCA AATACAATTA TGACTATACA
TTTTTGAACA ATGTGCCTTT CTCCAAAGAT TTCATATACT TGTTAGCCTC GCATATCCCC
CTGGGCACCC TCAACTTTGG CTCTGTGGCC GAAAGTCACT GGCAATATCC GTCTTTCATA
AACCAGACCC AGGCTCAAAT CGTGCGACAG AATTCAGCCC ATTTTCCATA TGGTGATTCA
GAAAGCTACC GACACATGTG TCGCTATTTT AGCGGGTTCT TCTACAAGCA TCCGTTCCTA
CAACAATACC AATACTACTG GCGTGTAGAG CCTGGTGTAA AGTTTTACTG TGATGTCAAC
TACGACGTGT TCAAGTTCAT GAACTCTCAC GGGAGGAAAT ATGGATTCGT TCTTTCATTG
TTTGACTACA GAGACACCTT GCCAACATTG TGGGATCATG TCAAGGACTT CATGGTAGAG
AAAGGCATCA CAAATCCTCC TTTAATCGAT TTGGTAAAGA ACAATAACGT TTATGAATCC
TATAATCTCT GCCATTTCTG GTCCAACTTC GAGATTGCCG ATTTGTCCAT ATTTCGCAAT
GAAGAATACG AAGAATTGTT CCAGTATCTT GACGGAAAGG GTGGGTTCTA CTACGAGCGA
TGGGGCGACG CTCCGATCCA TACCATGGCA ATGTCGTTGT TTCTCCAGAA ACACGATCTT
CATTGGTTTA ATGACATAGG CTACTACCAT GCACCGTACC TCCAGTGTCC ACAGGAGTCA
GCTACGTTTC TCAAGAACAG ATGCAGCTGC AATCCCGACG ATGACTTCTC GTACGACGAT
TTGAGTTGCA CCAGTCATTT TCTCGACATC ATGGGTAATG CCTAA
 
Protein sequence
MAAITSYWRL HVVVFLLLIP FYASKYETGD SKKTVLDSGY SDDAGNERAT FLILCRDEDV 
YELLETVQNL EDRFNSKYNY DYTFLNNVPF SKDFIYLLAS HIPSGTLNFG SVAESHWQYP
SFINQTQAQI VRQNSAHFPY GDSESYRHMC RYFSGFFYKH PFLQQYQYYW RVEPGVKFYC
DVNYDVFKFM NSHGRKYGFV LSLFDYRDTL PTLWDHVKDF MVEKGITNPP LIDLVKNNNV
YESYNLCHFW SNFEIADLSI FRNEEYEELF QYLDGKGGFY YERWGDAPIH TMAMSLFLQK
HDLHWFNDIG YYHAPYLQCP QESATFLKNR CSCNPDDDFS YDDLSCTSHF LDIMGNA