Gene PICST_37112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_37112 
Symbol 
ID4840825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp79428 
End bp80660 
Gene Length1233 bp 
Protein Length410 aa 
Translation table12 
GC content42% 
IMG OID640392140 
Productpredicted protein 
Protein accessionXP_001386615 
Protein GI150866876 
COG category[D] Cell cycle control, cell division, chromosome partitioning
[T] Signal transduction mechanisms 
COG ID[COG5057] Phosphotyrosyl phosphatase activator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.429914 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAAAG TAGGACTCGA ATGGACCACT CCATCCAAGA AGATCAATGC TCAGTCAGAT 
TTAGTCTATT TTAAGAAGTC AGTAGGCTAC CGAAAGCTAT TCAAAACTTT GACTTTGGTT
ATACTGAAAG TGACAAATGT CCAGCTTCCA GGGGAAATTC TTGATCCTGA AATAACAACC
AGAAAGAAAC CTGTTTCTAA AAGAAGTCTA CCTTCTCCTT CGGCAATTGT AGAGTCTGAA
CCCAAAAATA AACTTCAAAA GAATCACCAG GTTCGTAGTT TCAACGGTAT TTTAGAAATA
CTATCCCAGC TCAACAAGCT CATAGATGAC ACACCCCCTT TGGCTGGTCC AAGACGGTTT
GGAAATATGG CTTGTCGCGA CTGGCATGAC AAAGTAATTG CTCGTATCAA CAACTTGTTT
GACGAATACT TGGAGTTGCC TCAGAAAACA GATAAAGAAG GACTCTATTC TGAGCTTGGA
AGCTATTTGC TTAATTCGTT TGGATCAAAA ATCAGACTTG ATTATGGAAC TGGCCATGAA
CTTTCGTTTC TTGCCTTTTT AGGTGGGTTA TTTGAATTGA AAATACTCCC AGTGGACTTG
TTAAGTGGAG TAGATATCTT GACGATATTT GCTAAGTACT ATGACCTTGT ACGTAGACTC
ATTATAGACT ACAATTTAGA GCCAGCGGGT TCTCATGGAG TCTGGGGACT TGACGACCAT
TTCCATCTCA TCTACATTCT TGGAGCTGCG CAGTTCAATG GCGATAAACT GGCCCCTCCA
GTTCTGCAAG TTTTGACTAG TCAAGTCATA AGCACCTACA AGTCCACCAA TTTGTACGTC
AATGCTATAG CATTCATCTA CAAAATCAAA CTGGGTCCCT TTAACGAGCA TTCACCGATT
ATATACGATA TACATGCGTC TGTTGTCTTG TGGTCCAAAG TTCTTCAGGG CTTGTTTCGT
ATGTATGAAG TAGAAGTCTT TGGAAAGTTC CCTGTGGTAC AGCATTTCTA TTTTGGAAAC
GTTCTTTACA CTTGGAGAGA TAGTGAAACC AACCGAGAGT TACCCATTAC CAGCGGCGAT
GAATTACTCG AAGAAGACGA CTCTCCTGGA TTCCTAAATG GGTACCAGGG AGTGAACACT
ACAAGATCAA ACATATCCAT GACTGGTGCA CCATGGGCCA ACAAGCCTGC TAGAGCTATT
CCCCCAACAC ACGGCCATAT TGGCAGGAAA TAA
 
Protein sequence
MSKVGLEWTT PSKKINAQSD LVYFKKSVGY RKLFKTLTLV ISKVTNVQLP GEILDPEITT 
RKKPVSKRSL PSPSAIVESE PKNKLQKNHQ VRSFNGILEI LSQLNKLIDD TPPLAGPRRF
GNMACRDWHD KVIARINNLF DEYLELPQKT DKEGLYSELG SYLLNSFGSK IRLDYGTGHE
LSFLAFLGGL FELKILPVDL LSGVDILTIF AKYYDLVRRL IIDYNLEPAG SHGVWGLDDH
FHLIYILGAA QFNGDKSAPP VSQVLTSQVI STYKSTNLYV NAIAFIYKIK SGPFNEHSPI
IYDIHASVVL WSKVLQGLFR MYEVEVFGKF PVVQHFYFGN VLYTWRDSET NRELPITSGD
ELLEEDDSPG FLNGYQGVNT TRSNISMTGA PWANKPARAI PPTHGHIGRK