Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_37112 |
Symbol | |
ID | 4840825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009048 |
Strand | - |
Start bp | 79428 |
End bp | 80660 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640392140 |
Product | predicted protein |
Protein accession | XP_001386615 |
Protein GI | 150866876 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning [T] Signal transduction mechanisms |
COG ID | [COG5057] Phosphotyrosyl phosphatase activator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.429914 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTAAAG TAGGACTCGA ATGGACCACT CCATCCAAGA AGATCAATGC TCAGTCAGAT TTAGTCTATT TTAAGAAGTC AGTAGGCTAC CGAAAGCTAT TCAAAACTTT GACTTTGGTT ATACTGAAAG TGACAAATGT CCAGCTTCCA GGGGAAATTC TTGATCCTGA AATAACAACC AGAAAGAAAC CTGTTTCTAA AAGAAGTCTA CCTTCTCCTT CGGCAATTGT AGAGTCTGAA CCCAAAAATA AACTTCAAAA GAATCACCAG GTTCGTAGTT TCAACGGTAT TTTAGAAATA CTATCCCAGC TCAACAAGCT CATAGATGAC ACACCCCCTT TGGCTGGTCC AAGACGGTTT GGAAATATGG CTTGTCGCGA CTGGCATGAC AAAGTAATTG CTCGTATCAA CAACTTGTTT GACGAATACT TGGAGTTGCC TCAGAAAACA GATAAAGAAG GACTCTATTC TGAGCTTGGA AGCTATTTGC TTAATTCGTT TGGATCAAAA ATCAGACTTG ATTATGGAAC TGGCCATGAA CTTTCGTTTC TTGCCTTTTT AGGTGGGTTA TTTGAATTGA AAATACTCCC AGTGGACTTG TTAAGTGGAG TAGATATCTT GACGATATTT GCTAAGTACT ATGACCTTGT ACGTAGACTC ATTATAGACT ACAATTTAGA GCCAGCGGGT TCTCATGGAG TCTGGGGACT TGACGACCAT TTCCATCTCA TCTACATTCT TGGAGCTGCG CAGTTCAATG GCGATAAACT GGCCCCTCCA GTTCTGCAAG TTTTGACTAG TCAAGTCATA AGCACCTACA AGTCCACCAA TTTGTACGTC AATGCTATAG CATTCATCTA CAAAATCAAA CTGGGTCCCT TTAACGAGCA TTCACCGATT ATATACGATA TACATGCGTC TGTTGTCTTG TGGTCCAAAG TTCTTCAGGG CTTGTTTCGT ATGTATGAAG TAGAAGTCTT TGGAAAGTTC CCTGTGGTAC AGCATTTCTA TTTTGGAAAC GTTCTTTACA CTTGGAGAGA TAGTGAAACC AACCGAGAGT TACCCATTAC CAGCGGCGAT GAATTACTCG AAGAAGACGA CTCTCCTGGA TTCCTAAATG GGTACCAGGG AGTGAACACT ACAAGATCAA ACATATCCAT GACTGGTGCA CCATGGGCCA ACAAGCCTGC TAGAGCTATT CCCCCAACAC ACGGCCATAT TGGCAGGAAA TAA
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Protein sequence | MSKVGLEWTT PSKKINAQSD LVYFKKSVGY RKLFKTLTLV ISKVTNVQLP GEILDPEITT RKKPVSKRSL PSPSAIVESE PKNKLQKNHQ VRSFNGILEI LSQLNKLIDD TPPLAGPRRF GNMACRDWHD KVIARINNLF DEYLELPQKT DKEGLYSELG SYLLNSFGSK IRLDYGTGHE LSFLAFLGGL FELKILPVDL LSGVDILTIF AKYYDLVRRL IIDYNLEPAG SHGVWGLDDH FHLIYILGAA QFNGDKSAPP VSQVLTSQVI STYKSTNLYV NAIAFIYKIK SGPFNEHSPI IYDIHASVVL WSKVLQGLFR MYEVEVFGKF PVVQHFYFGN VLYTWRDSET NRELPITSGD ELLEEDDSPG FLNGYQGVNT TRSNISMTGA PWANKPARAI PPTHGHIGRK
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