Gene PICST_36364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_36364 
SymbolALG7 
ID4839709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp1088373 
End bp1089860 
Gene Length1488 bp 
Protein Length495 aa 
Translation table12 
GC content47% 
IMG OID640391024 
Producttunicamycin resistance protein 
Protein accessionXP_001385217 
Protein GI150865836 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.243086 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.122495 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCGTC TGAGACTTTT TCGGCTCTCG GTGCTCGTGG CTTCTGTTGC GCTCATAACC 
CCCAACAATC CACTCCAGGC TCTGGTAGCC TTTGCTGGGA TTGGGTATGT AGTGACAGTT
AGTTTGATTC CACGAGTTGC ACCAAGTTTT ATCCGTATTG GACTCAAAGG GCGTGATCTT
CTGAAACCGC CTCCTGTTGA CTATATCGCT GAGTCCATGG GTATCGTTTC GGCGGTGACC
TACTTGTTCT TGATGTTTGG GCTTATTCCG TTTGTATTCT TCAAGTACTT AGTTCTCTTC
ACGTCTCTTT CCAACGATTC AAGTATCTCT GATAATTACA AAGCCCAGTA CCAGTCGATA
TCCAACGTGC GGTTGTTTCC GCACAACAAG TTGGCTGAGT ACTTGAGTGC CATTTTGTGT
TTGCAGAGTA CGACGCTTCT AGGGTTCCTC GACGACCTCT TTGATATCAG GTGGAGACAC
AAATTCTTCC TTCCTGCCGT AGCATCGTTG CCGTTGCTAA TCGTCTACTA CGTCGATTTC
TCGGTGACGT CGATCGTGGT GCCTACTTTT GTCACCGACT TGCCTGGTGG AGACTTGTTG
ATCTACGTCC TTAACAGTGT CATCCGCATA GGCAATCATT TTGTTACGAA GGTCACGGGC
TTGTCGTTCA GTACCTTGGC AGCAGATTAT GAGGTACCTA AAGCAACTCC TAAGTTGATC
GATTTGGGAG TGTTCTACTA CGGCTACATG TCTGCTGTTT CTATTTTCTC ACCAAATTCC
ATTAACATCT TGGCTGGGAT TAACGGTTTA GAAGTGGGCC AATCAATTGT TCTTGGCTTG
ATTGTCCTCG TCAACGACGC TTGCTACTTG CTCTCCGACA ACATCTCAGG GGAAGCGTAC
GACTTCCACT TATTTTCGGT GATATTCATC GTACCCTTTA TGGGTGTATC GTTGGGGCTT
CTCTCGTTCA ACTGGTACCC TTCCAAGGTG TTTGTAGGTG ATACTTATTG CTACTTCAGT
GGCATGGTGT TTGCAATTGT TGCAATCTTA GGCCATTTCT CCAAGACGTT GTTGTTGTTC
CTCTTGCCCC AGATTCTCAA CTTTGTCTAC TCTGTGCCGC AGTTGTTTGG CATCGTACCG
TGCCCAAGAC ACAGATTGCC CAAGTTCAAT AAGGACTCCG GACTTATGAC CCCGAGCTAC
GGCGAATTGA AACACAAGGC TTTTGTAGGA GTAGCCATGC TTACGGTGTT GGAGAAGTTC
CGGTTGATCC ACCTCAAGAG AGATGCGGAA ACTAATGAGA TCAAGGAGTT CTCCAACATG
ACCTTGATCA ACTTGTTCCT TGTGTGGTTC GGTCCGTTAC GTGAAGACAC CCTTTGTGTC
GTGATCTTGA TGGTGCAATT GACTATCGGC ATTGCCATGA TCTTTGTAAG ACACACTGTG
GGACCATGGA TGTTTGGCTA TGATAATTTG AGCTGGGGAG TAAAGTAG
 
Protein sequence
MFRSRLFRLS VLVASVALIT PNNPLQASVA FAGIGYVVTV SLIPRVAPSF IRIGLKGRDL 
SKPPPVDYIA ESMGIVSAVT YLFLMFGLIP FVFFKYLVLF TSLSNDSSIS DNYKAQYQSI
SNVRLFPHNK LAEYLSAILC LQSTTLLGFL DDLFDIRWRH KFFLPAVASL PLLIVYYVDF
SVTSIVVPTF VTDLPGGDLL IYVLNSVIRI GNHFVTKVTG LSFSTLAADY EVPKATPKLI
DLGVFYYGYM SAVSIFSPNS INILAGINGL EVGQSIVLGL IVLVNDACYL LSDNISGEAY
DFHLFSVIFI VPFMGVSLGL LSFNWYPSKV FVGDTYCYFS GMVFAIVAIL GHFSKTLLLF
LLPQILNFVY SVPQLFGIVP CPRHRLPKFN KDSGLMTPSY GELKHKAFVG VAMLTVLEKF
RLIHLKRDAE TNEIKEFSNM TLINLFLVWF GPLREDTLCV VILMVQLTIG IAMIFVRHTV
GPWMFGYDNL SWGVK