Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_35800 |
Symbol | |
ID | 4838946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | - |
Start bp | 324323 |
End bp | 325117 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 12 |
GC content | 46% |
IMG OID | 640390261 |
Product | predicted protein |
Protein accession | XP_001384362 |
Protein GI | 126135676 |
COG category | [S] Function unknown |
COG ID | [COG1584] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCATCCA TCGAGTCAAA TGCTTCCAAC AATAAAGCTG AAAGTTTGTC CAACGACGAC TCAGTGCCCT ATAAAACTGT CACCTACTCC GGAGAAGGCA ATGAATATGT TATCATCGAC GGTAAGAAAT ACTTGAGACA TGAATTGATG ACTGCCTTCG GTGGTACCTT CAATCCTGGT TTGGCACCCT ACCCTAAGCA TCAATTCGGT AATGCTGCTG CCCTTGGTTT GGCCTCTTTC GCAGTTACCA CTATGGTTCT CGGTTTGTTC TACTCGGGGG CTATGGGCAT CAGTACTCCT AATGTCGTTG TTAGTATGTG TGTTTTCTAC GGTGGTGCTG TTGAACTCCT TGCCGGAGTT TGGGAGATGG CCATTGGTAA CACTTTTGCC GGCACTGTAT TCGTTTCTTT TGGAGCCTTT TGGATTTCTT TCGGTGTAAT ATTCATTGAA GCCTTTGGCA TTGCATCAGC CTATGCTGAT GACCCAGCCC AATTTGGCAA TGCTGTAGGT ATTTATCTTA TTGGCTGGGC GTTTTTCACC TTCATGATGT TGACTCTTGT GTTGAAGGCT ACTTGGCCAT TCATTGCCTT ATTTGTCACT TTGGATACTG CCTTTATCTT GTTAGCTGCC GGTAACATGA CAGGAAACGC CCATGTCGTC AAAGCAGGCG GAATTTTTGC ATGTATCACT GCTTCGTGTG GATTCTGGAT TATGTATGCG GGTGTTTCTG TTCCTACCAA CAGCTACCTC CATCTTCCAG TGATGCAGGT GCCTATCATT GGCTCCAAGA GATAG
|
Protein sequence | MSSIESNASN NKAESLSNDD SVPYKTVTYS GEGNEYVIID GKKYLRHELM TAFGGTFNPG LAPYPKHQFG NAAALGLASF AVTTMVLGLF YSGAMGISTP NVVVSMCVFY GGAVELLAGV WEMAIGNTFA GTVFVSFGAF WISFGVIFIE AFGIASAYAD DPAQFGNAVG IYLIGWAFFT FMMLTLVLKA TWPFIALFVT LDTAFILLAA GNMTGNAHVV KAGGIFACIT ASCGFWIMYA GVSVPTNSYL HLPVMQVPII GSKR
|
| |