Gene PICST_3529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_3529 
SymbolHYR6.3 
ID4836797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp2723119 
End bp2724294 
Gene Length1176 bp 
Protein Length392 aa 
Translation table12 
GC content41% 
IMG OID640388112 
Producthyphally regulated cell wall protein 
Protein accessionXP_001382756 
Protein GI150864067 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTTCTTGCTG CTGATATAAC TTCTCCAACA ATTGATAGAG GGGTTGTTAA CCTTTCCATT 
GGAGACATCA CAATTGAATC TGGTGCTTAC TGGTCCATTA TTGACAATGC AGTTTCTGTA
CTTGCCGGTA ATTTAGATGT AAAGACTGAT GCTGGATTCT ACATTTCTTC AACCCAGAGT
TTAATTGGTT TATCTGTTAC TCTTGCTTCT GGTTTAGGAT CGATCACTAA TGATGGTATT
ATTGCATTTA ATTCGGTTGT CTCGTTGGTT GCTCCTAATT ACAACTTGAT TGGTCTCTCA
TTCACAAACA ACGGAGAAAT GTATTTGGGT ACTAACGGCT CTGTTGTTGG AGCTCCCCCA
ATCAACCTCA TTGCCCCAAG CTGGACTAAC ACAGGTTTGT TGGTGATCTA CCTGCAAACA
AGAAGTGCAG ATGGTATTGT CAATCTCGGA GGAACTGGAT TGGTTATTCA AAACAATGGC
CAAATCTGCT TAACTAATGA GCTTTACCAA GCTTCAACCC AAATTCGTGG TACTGGGTGT
ATAACTGCAA ATCTAGATTC TTCAATTTTC TTGGCTAATG GTTTGTTAGG AGTTGATCAA
TCTCAAACAT TTTATTTGGC TGACTCCAAA TCCTCCATCA GAGCAAATGC AATTGCTGTT
CCACAAACGT TCACTGTTGC TGGTTTTGGT AACGGTAACA TTATTGGCTT AGATATTCCA
CTTGCAACTG TCTTTCCACT TAGCTCGTGG AGTTATAGCT CAAGTACAGG TATTTTAACT
CTAAGAGGTC TTGGTTTGTT GTCTCAAAAC TTTAACATTG GTCCAGGATA TAATAGCAAT
TTGTTTTCAA TCACAACGGA TACCAGTCTT GGATTGGCCA GTGTTCCCTT AGGTGGTCTC
ACTTATAGTG GTCCAGTACC AAACGCAATC CCTTCTAACT GTCTGCCTTG TAAGAATTTA
CCAAGCGCAC CCGGTGCATC TCCAACTCTC ACTTCTACAA GTCTCACTAC CACCAAGACA
GATGGATCAA TTTGCACTGA CGTTGATCAG ATACTCATTT CCACTGATGG ACAAGGTACT
TGGTTTACAT CCACTTCCTT ATTATCCGAA ATTTGCAGCA CTATCCCAAA CTCCAAAACA
ACAGTTATAT CTACTTGGAC GGGCACTGCT ACAAAA
 
Protein sequence
VLAADITSPT IDRGVVNLSI GDITIESGAY WSIIDNAVSV LAGNLDVKTD AGFYISSTQS 
LIGLSVTLAS GLGSITNDGI IAFNSVVSLV APNYNLIGLS FTNNGEMYLG TNGSVVGAPP
INLIAPSWTN TGLLVIYSQT RSADGIVNLG GTGLVIQNNG QICLTNELYQ ASTQIRGTGC
ITANLDSSIF LANGLLGVDQ SQTFYLADSK SSIRANAIAV PQTFTVAGFG NGNIIGLDIP
LATVFPLSSW SYSSSTGILT LRGLGLLSQN FNIGPGYNSN LFSITTDTSL GLASVPLGGL
TYSGPVPNAI PSNCSPCKNL PSAPGASPTL TSTSLTTTKT DGSICTDVDQ ILISTDGQGT
WFTSTSLLSE ICSTIPNSKT TVISTWTGTA TK