| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_35192 |
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| Symbol | IRS4 |
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| ID | 4837446 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 1972770 |
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| End bp | 1974971 |
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| Gene Length | 2202 bp |
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| Protein Length | 628 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640388761 |
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| Product | Increased rDNA silencing protein |
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| Protein accession | XP_001382606 |
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| Protein GI | 150863950 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0269052 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTGAAA ACTCAACAGC CTCACATGCT GCGGCAATGG CAGCCTTCAA GAGTCTAGCC
AATAATAATA CTAGTAGTAG TTCTATCCCT AGTTCATATA AGATACCCAC ATCCGCCGAA
AGTGCTAAGA TACGTTCGCC AACTCCGCTC AACTCGAATG CTGCAGTTCC ACAGAATCGC
CCAAAAAGAG CTGCCACTTC TGTCGGAGTA AAATCTACAA CTAAACCTAT GGCTAAATCA
ATTGCTACAC CAATATCTGG TAAACCCATT CCAACAGCAG TAAAACCATC TAAAGCAAAT
GGATTCGTCT CCGGAGTTAA CAAGCAACGT GCTCCACTAC CACTTGCTAG AGCAGACTCC
TCACTTGTGT TGCTGGCAGC GAAATTGGCT GCGTCCGAAA GCTTGGCTCT GAAGAATAGA
CTGACTTCTT CATTCTCCTT TGGCAATATA TACACTGGAA ATGATACAGA GTCATTGCTG
TCACGAGCAT CATACGACAA CAATTCTTAC CAAGAGTCTT CCAGGCGATA TCCGCAACTG
AAAGGTCTAC AAGCATCGCT GTCTCTGAGT ACTATGCCCA AGGATATGAT CAACAGTGTA
AAACAATCTA TAGAATCTAA ATCAGTAGGA AAAGATCCGA GCCAAAAACG AATTTCGTCT
TTATACGAGC CCCAAGAGAT GTTGAAGAAC TTGCGTAGCT CCATTTCTGC CAAAACTGTC
TCAGGAACAA GTGTGAGACC CATGATATCT GAGAAGAACC AGGCAATGAT CAATGGAATC
AGGGACAGAA TAGACCTGAA ACGCATAGTC ACCGATGTTT CCAAGACTTC ACTGCTTTCA
TCGGAAGATG TATCTCACCT ACAAGGGCAC GATCTCGCCA ACACACACAC ATACCAACCT
TTAAATAACA ATGATTCGTT CTCATCCTTT GGTTCTTCCT TTCTGGAAGT TGAGCCTTCA
AGTCTTTCCA AAGCCAACGG CGAAGAAGAT GAAGAGTCGA TAATAGACAA TGCTAGTGCA
ACTGTTCAGG AGCACCCTCC TGTGAATGAG GAAGTAGCAA AGAACATGAA TATGGACAGT
TCTTCTGAGA GTTTATCCAA CAACAGTAAT CCACCTCAAA TCTCAGTTCA GGGCCAGATG
ATCCTGACAG ACACACCTAT AGAAACTCCC AAAGCAAAAC CGAAAAGAAG ACCGCCTCCT
GATCTTGTGA GTCTTCAACT GTATAGCGGC GCTTCTTTTG CTAGTAGTAC ATTCGTAGAT
GATGAGTCGA CAGGTGGTCC AAGGGAAGAA ACTCTGATTC CGATGTTCCA TGACAAATCT
GTTGAATCTC TTCCAGATGG ATACTCTTCC ACTGATGCCG ATATCACGTT GGAAAATGAT
CGAAACTCGT CTCAATCCAA GTTTCCTCAA TTCCCTGACA TAAAAAAACA TAAAAAAACT
GAGAAAAAGG GAAATTTTCT TAAGAAATAT TCTCGACCAT TAAAATGTGT GGATAACGAA
GTTAACCTTC TTGATCTGGA CGAAGCTGAG GAAGAAGACG AGACTGACAG TTCATATGGA
AAGAGAGCCC CGCAGATCTT GACTCCTCCT ACACAACAGG TGCGATTGAA GTCGACAATG
AGAAAAACTA ACAGAAGGAA AGAGAAAAAG TATATGTTCA ACGAAAACAA ACCGTGGAAA
AATCACAACG AATTGTCTAG TATCTCAGAA CAAGAAAGAA AACGGTACGA AGGTCTCTGG
GCCAGTAACA AAGGCAACTA TATGAACTCA GTAGTCACCA GGTTAGTAGG TGTGGACTAT
GACCTGGGTA AATCTGAACC AGAAGTGGAA GAAGAAGAGG ATTCAAGAAA AGCAGCTCGT
CTCTCTTCCA AAGCTGGAAC TTTTGATTCT GGCAAAATGA GTGATCAAGA AAACTTTCAT
GGTTTACTTT CTGTTGAAGT CGACCAGCTT ATACATGGAG TCGTTGTTAG AAGAATATGG
AAGAGAAGTA GATTGCCACG AGAAACACTA GAAGCGATCT GGAACTTGGT TGACTTTAGA
AAAGATGGTA CGCTTAACAA ACCTGAATTT GTAGTTGGTA TGTGGCTTGT TGATCAATGT
TTGTATGGGC GGAAGTTGCC GAAGAAGGTA GAGAACGAGG TATGGGATAG TTTGGGAAGC
ATTGGGTTGA ATGTAGTAGT ACGCAAGAAA GGAAAACGAT AG
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| Protein sequence | MSENSTASHA AAMAAFKSLA NNNTSSSSIP SSYKIPTSAE SAKIRSPTPL NSNAAVPQNR
PKRAATSVGV KSTTKPMAKS IATPISVKPS KANGFVSGVN KQRAPLPLAR ADSSLKSSRR
YPQSKGLQAS SSSSTMPKDM INSVKQSIES KSVGKDPSQK RISSLYEPQE MLKNLRSSIS
AKTVSGTSVR PMISEKNQAM INGIRDRIDS KRIVTDVSKT SSLSSEDVSH LQGHDLANTH
TYQPLNNNDS FSSFGSSFSE VEPSSLSKAN GEEDEESIID NASATVQEHP PVNEEVAKNM
NMDKTPKAKP KRRPPPDLVS GPREETSIPM FHDKSVESLP DGYSSTDADI TLENDRNSSQ
SKFPQFPDIK KHKKTEKKGN FLKKYSRPLK CVDNEVNLLD SDEAEEEDET DSSYGKRAPQ
ILTPPTQQVR LKSTMRKTNR RKEKKYMFNE NKPWKNHNEL SSISEQERKR YEGLWASNKG
NYMNSVVTRL VGVDYDSGKS EPEVEEEEDS RKAARLSSKA GTFDSGKMSD QENFHGLLSV
EVDQLIHGVV VRRIWKRSRL PRETLEAIWN LVDFRKDGTL NKPEFVVGMW LVDQCLYGRK
LPKKVENEVW DSLGSIGLNV VVRKKGKR
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