Gene PICST_34790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_34790 
Symbol 
ID4836894 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp164427 
End bp165152 
Gene Length726 bp 
Protein Length214 aa 
Translation table12 
GC content50% 
IMG OID640388209 
Producthypothetical protein 
Protein accessionXP_001382263 
Protein GI150863702 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.417258 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTACT ACAACGAATA TGCTGAGGAA CATTGGAACT CACTTGATCC GTACGAAGAC 
AAAGAAGGAA ATAGACGTCG TTTGCCTAAT GATATCAGTA CCAAGGAGGA GCAGAAGATC
TGGCGAAACA TTCAGCGCAA AGCTTGGGTC CACGACAAGT GTTTTCTAGG ATCTTGTGGA
GTTGGCATGG ATTGTGGCCT TGGGCTCGCT CCATTAGTGG TACTACTTTT TCCCGTACTA
GGCCCACTAG TGATGTACGC AGTGCATCTG AACCTCATAG CGGAGGCAGA GAGAAAAGTG
CATCTCCCCT CGAAGCTACA GGCCAAGTTG CACGGTAACA TTGTATTGAG CTTGATCATA
ACTTTTCCAC CAGTAATCGG CTCGTTCTTT GGTTGGCTTC ATGGCTGTTC GACACGAAAT
GCCGGGCTTC TTTACCAGTA CTTGGAGTTT TTGGCTCAAG AGAGGGCGCA GAATAAGACG
GCAACTTACG TCGGTGCGGC GCGCGATCTT CCGAACACAC CGGAATTTGG CAGATCCGCC
CCACCACGGG AAATGAGCTC TCAACAGCAA AGAGGCCCAC CACCAAGCAC TCATCCGCTG
GAACAACGGT CGTATACACT GCCAGTGTAT CAAACGCGAA AGGCCCCTAC TTTCAGCAGA
CAGCCCAAAT CCAGAACGAC TAATACCATA GTGGTGGGTG ACCAACAGCT GTCTGGGTTT
GTGTGA
 
Protein sequence
MDYYNEYAEE HWNSLDPYED KEGNRRRLPN DISTKEEQKI WRNIQRKAWV HDKCFLGSCG 
VGMDCGLGLA PLVVLLFPVL GPLVMYAVHS NLIAEAERKV HLPSKLQAKL HGNIVLSLII
TFPPVIGSFF GWLHGCSTRN AGLLYQYLEF LAQERAQNKT ATYVGPPPST HPSEQRSYTS
PVYQTRKAPT FSRQPKSRTT NTIVVGDQQS SGFV