Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_34790 |
Symbol | |
ID | 4836894 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | + |
Start bp | 164427 |
End bp | 165152 |
Gene Length | 726 bp |
Protein Length | 214 aa |
Translation table | 12 |
GC content | 50% |
IMG OID | 640388209 |
Product | hypothetical protein |
Protein accession | XP_001382263 |
Protein GI | 150863702 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.417258 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACTACT ACAACGAATA TGCTGAGGAA CATTGGAACT CACTTGATCC GTACGAAGAC AAAGAAGGAA ATAGACGTCG TTTGCCTAAT GATATCAGTA CCAAGGAGGA GCAGAAGATC TGGCGAAACA TTCAGCGCAA AGCTTGGGTC CACGACAAGT GTTTTCTAGG ATCTTGTGGA GTTGGCATGG ATTGTGGCCT TGGGCTCGCT CCATTAGTGG TACTACTTTT TCCCGTACTA GGCCCACTAG TGATGTACGC AGTGCATCTG AACCTCATAG CGGAGGCAGA GAGAAAAGTG CATCTCCCCT CGAAGCTACA GGCCAAGTTG CACGGTAACA TTGTATTGAG CTTGATCATA ACTTTTCCAC CAGTAATCGG CTCGTTCTTT GGTTGGCTTC ATGGCTGTTC GACACGAAAT GCCGGGCTTC TTTACCAGTA CTTGGAGTTT TTGGCTCAAG AGAGGGCGCA GAATAAGACG GCAACTTACG TCGGTGCGGC GCGCGATCTT CCGAACACAC CGGAATTTGG CAGATCCGCC CCACCACGGG AAATGAGCTC TCAACAGCAA AGAGGCCCAC CACCAAGCAC TCATCCGCTG GAACAACGGT CGTATACACT GCCAGTGTAT CAAACGCGAA AGGCCCCTAC TTTCAGCAGA CAGCCCAAAT CCAGAACGAC TAATACCATA GTGGTGGGTG ACCAACAGCT GTCTGGGTTT GTGTGA
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Protein sequence | MDYYNEYAEE HWNSLDPYED KEGNRRRLPN DISTKEEQKI WRNIQRKAWV HDKCFLGSCG VGMDCGLGLA PLVVLLFPVL GPLVMYAVHS NLIAEAERKV HLPSKLQAKL HGNIVLSLII TFPPVIGSFF GWLHGCSTRN AGLLYQYLEF LAQERAQNKT ATYVGPPPST HPSEQRSYTS PVYQTRKAPT FSRQPKSRTT NTIVVGDQQS SGFV
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