Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_34758 |
Symbol | |
ID | 4837182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | + |
Start bp | 36764 |
End bp | 37399 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640388497 |
Product | predicted protein |
Protein accession | XP_001382233 |
Protein GI | 150863680 |
COG category | [S] Function unknown |
COG ID | [COG2078] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00296] uncharacterized protein, PH0010 family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.199149 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAAAG CTTTATGTTG CTACGCTTTT GAAACTCTCT ACACTCGCTT AAATCCAGAG TCAAAAAAAC TTTCTCTTTC CAAGTACTAC GACCAATTAA ATGAACTGGC CTCCCATTTT CGGTCGCCTG CTCCACTTTT CATCACTTGG AACCAAGATG ACAGATTAAG AGGTTGTATT GGCACATTTC TGCCTTTGTC AATTGAGTCA GGCATAAGTC GGTTTTCGTT AACAGCAGCT TTACAAGATC CTCGTTTCCA CCCAATCTCC AAACGAGAGT TGAACTCGTC TTTGAAGGTT AGCGTTACCT TGCTAGACAA TTTTGTAGAA ATCAATACCT GGGACGATTG GAAAATTGGT TTACATGGTC TTCGCATTTC ATTTGAATAC GAGAATGATT ATTATCTGGG CACTTTTTTA CCCTCTGTAG CGGAGGAAGA GAACTGGGAC CAAACAACTA CGTTATACTA CTTACTCAAA AAAGCAGACT ACAATGGCGT GAAGAAAGAT AGGGTCGCTC AGTTCTACAC GAATGGTTTG AAGGAGGGCT GGCTCACTTT AACAAGATAT GATGGGTTAA AAGACTCGTT GACCTACGAC GACTTTTTAG CAATTAGAAA CAGCATTGCA TTATAG
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Protein sequence | MSKALCCYAF ETLYTRLNPE SKKLSLSKYY DQLNESASHF RSPAPLFITW NQDDRLRGCI GTFSPLSIES GISRFSLTAA LQDPRFHPIS KRELNSSLKV SVTLLDNFVE INTWDDWKIG LHGLRISFEY ENDYYSGTFL PSVAEEENWD QTTTLYYLLK KADYNGVKKD RVAQFYTNGL KEGWLTLTRY DGLKDSLTYD DFLAIRNSIA L
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