Gene PICST_34758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_34758 
Symbol 
ID4837182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp36764 
End bp37399 
Gene Length636 bp 
Protein Length211 aa 
Translation table12 
GC content41% 
IMG OID640388497 
Productpredicted protein 
Protein accessionXP_001382233 
Protein GI150863680 
COG category[S] Function unknown 
COG ID[COG2078] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00296] uncharacterized protein, PH0010 family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.199149 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAAAG CTTTATGTTG CTACGCTTTT GAAACTCTCT ACACTCGCTT AAATCCAGAG 
TCAAAAAAAC TTTCTCTTTC CAAGTACTAC GACCAATTAA ATGAACTGGC CTCCCATTTT
CGGTCGCCTG CTCCACTTTT CATCACTTGG AACCAAGATG ACAGATTAAG AGGTTGTATT
GGCACATTTC TGCCTTTGTC AATTGAGTCA GGCATAAGTC GGTTTTCGTT AACAGCAGCT
TTACAAGATC CTCGTTTCCA CCCAATCTCC AAACGAGAGT TGAACTCGTC TTTGAAGGTT
AGCGTTACCT TGCTAGACAA TTTTGTAGAA ATCAATACCT GGGACGATTG GAAAATTGGT
TTACATGGTC TTCGCATTTC ATTTGAATAC GAGAATGATT ATTATCTGGG CACTTTTTTA
CCCTCTGTAG CGGAGGAAGA GAACTGGGAC CAAACAACTA CGTTATACTA CTTACTCAAA
AAAGCAGACT ACAATGGCGT GAAGAAAGAT AGGGTCGCTC AGTTCTACAC GAATGGTTTG
AAGGAGGGCT GGCTCACTTT AACAAGATAT GATGGGTTAA AAGACTCGTT GACCTACGAC
GACTTTTTAG CAATTAGAAA CAGCATTGCA TTATAG
 
Protein sequence
MSKALCCYAF ETLYTRLNPE SKKLSLSKYY DQLNESASHF RSPAPLFITW NQDDRLRGCI 
GTFSPLSIES GISRFSLTAA LQDPRFHPIS KRELNSSLKV SVTLLDNFVE INTWDDWKIG
LHGLRISFEY ENDYYSGTFL PSVAEEENWD QTTTLYYLLK KADYNGVKKD RVAQFYTNGL
KEGWLTLTRY DGLKDSLTYD DFLAIRNSIA L