| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_34117 |
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| Symbol | |
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| ID | 4850971 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 592605 |
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| End bp | 594725 |
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| Gene Length | 2121 bp |
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| Protein Length | 516 aa |
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| Translation table | |
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| GC content | 42% |
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| IMG OID | 640392679 |
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| Product | predicted protein |
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| Protein accession | XP_001387344 |
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| Protein GI | 126273932 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00012281 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.103056 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGTAA ATAATATTGA ACTCATCAGG AATTGCGCTT CCTGCAGGAG GCTACATCTG
CTTTGGTCTT TCCTTCTTAA CTATGCTATT TCAGGTTGAT GATGAAATTA CAAACAAAGG
CTAAACACGG TTTGTGGAAT TCAGTCGTTA AAGCGAAATA TCCGAGTCTA ACAGAAGCAC
TGGCAGAATT TTTGACTTTG TATTTTCCCT TTTTTACCAA TTGCTACTTC CTTCTATCTG
CGTCTGTCTC TGTAGCGCTA ATAACCATTC TTCACTGTTT GTGGTCTTCA ATCCAATAGC
CACAATATTC AAGAGTCAGA AGATAGTCAA GAAGAATCGA GTTGTTTTTT CTTGAATTTC
ATAAGATTTC ACAAGAAGGC CATTTCAAAG AATTTTAATA CTACTTTTCC TCAATATAAA
GCTATCATCA CTAGCCTAGA GTTGAAGTTA GACAGAGAAG AGTATAGAAT ACTCAACACT
ACAATTGTCA ACTTATAATT CAGTATGAGC TACAACAATA AGAAGTTCGA TCCTCCTTCC
TACCCTCCTC CGTCAGCAAA CAACTACGAC CCTCAGAACC AACAGGGTTA TGGAGGGTAC
CAACAGCCTC AATACTCGCA GGAGCCTGAA GAGGAATTGT ATGATCAAAC CGACTTGGAA
AATGGCCAAT TCCAGAATTA CAGCGAGAAG CCAGTGAGTT CCGAAAACTT TGAGGAAAGT
TTTAAGATAG AAAAGCCAAA ATGGAATGAC TGGCCATTCA CACTTTTCTT CCTCGCTGTC
GTTGTTGGAT TCGTAGCTGT AGCAGTAATT ACTATCAATG CCTTGAGAGC TAGGTTCGGT
TTTGAAGGAA CAGGCATCTA TGGCTCGTCC AATACCTTCA GTTTGAATAC GAATACGATC
GTCTTGTTCG CTTTTGTCAT TGTCGTGGGG TTGGTATTGT CTACTTTGAT TATGGTATAC
GCTCGTATGG CTCCCCGGAT TTTTATCACT ACTGGTTTGA TCTTGAATGT GGTATTGGGC
ATCGGTACAG CCATTTATTA TTTCGTAGTT CACTATTACT CTGCTGCCAT TGTGTTCTTG
GTGTTCTCGC TCTTCTCGGC CTACTGCTAC TGGAGTTGCC GTAGCAGGAT CCCGTTCAGT
GCGACCGTTC TTGAGATTAC CATTGATGTC ATGAAAAGAT ACCCCTCAAC CTTGGTAGTT
TCCCTCATTG GTATAATTGC TTCGGCTGCT TTCAGTGCTT TGTTTAGTAT TGTAATTGTC
GCTACTTATG TTAAGTTTGA TCCTAACCCA AACAACGAAG GTTGTTCTGT TGGTGGAGGC
AACTGTTCGC AAGCCAAGTT GGTAGGTGTT CTTGTGTTTG TGTTCTTTGC TGGATTCTAC
ATATCTGAAG TTTTCAGAAA TGTCATCCAT GTTGTCATAG CTGGTATTTA TGGTACCTGG
TATTACTTGG CTGGATCCGA TCAGGGTGCC CCAAGAGTTC CAGCTTTAGG TGCTTTGAAG
AGAGCCTTGA CTTACTGTTT TGGTTCTATT TGTTTCGGTT CTTTGATCGT AGCTTTTATC
CAACTTCTCA GGGCATTTAT CCAAGCTCTT AGACAGAATG CCTTAGCTGG TGGTGACAAC
TGCGCCTTCT GTGCTCTCTG TATTCTTGAT TTGATCGTTG GTTTCATCGA CTGGATGGTC
CGTTACTTCA ACCATTATGC TTACTGCTAC GTTGCTTTAT ACGGAAAGAG TTATCTCAGA
TCAGCAAAGG ACACCTTCGA CTTGCTCCGT TATAAAGGTA TGGATGCTTT GATTAATGAC
TGTTTCATTA ATACTGCATT GAATTTCTAT GCCTTGTTTG TTGCCTTCGT CACTGCTCTC
TTGTCTTTCC TCTACTTGAG ATTCACTGAA CCAGATTACA ATGCTGACGG TAACTTCTAT
GCGCCAGTTA TGGCGTTTGC CTTCTTAATC TCTGGACAGA TCACCCGTGT TGCTACTTCA
GTCATCGAGT CTGGTATTTC TACATTCTTC GTCGCCTTGG CTAAGGACCC AGAAGTGTTC
CAGATGACTA ACAGGAACAG ATTCGACGAG ATCTTCAGAA ACTACCCCCA GGTATTACAG
AAGATCACCA GTGACCATTA G
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| Protein sequence | MQKFDPPSYP PPPQYSQEPE EELYDQTDLE NGQFQNYSEK PVSSENFEES FKIEKPKWND
WPFTLFFLAV VVGFVAVAVI TINALRARFG FEGTGIYGSS NTFSLNTNTI VLFAFVIVVG
LVLSTLIMVY ARMAPRIFIT TGLILNVVLG IGTAIYYFVV HYYSAAIVFL VFSLFSAYCY
WSCRSRIPFS ATVLEITIDV MKRYPSTLVV SLIGIIASAA FSALFSIVIV ATYVKFDPNP
NNEGCSVGGG NCSQAKLVGV LVFVFFAGFY ISEVFRNVIH VVIAGIYGTW YYLAGSDQGA
PRVPALGALK RALTYCFGSI CFGSLIVAFI QLLRAFIQAL RQNALAGGDN CAFCALCILD
LIVGFIDWMV RYFNHYAYCY VALYGKSYLR SAKDTFDLLR YKGMDALIND CFINTALNFY
ALFVAFVTAL LSFLYLRFTE PDYNADGNFY APVMAFAFLI SGQITRVATS VIESGISTFF
VALAKDPEVF QMTNRNRFDE IFRNYPQVLQ KITSDH
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