Gene PICST_33961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_33961 
Symbol 
ID4840856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp873434 
End bp874285 
Gene Length852 bp 
Protein Length283 aa 
Translation table12 
GC content44% 
IMG OID640392171 
Productpredicted protein 
Protein accessionXP_001386583 
Protein GI150866853 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0111936 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGATG AGCTACTCAG AATCAAACAG CTTGATTTGA TACGGCTGAA GATGCAGACT 
GTGAAAGACC AGCTGCTGAG ACGAGATAAA ATGAACGAGT ATTTAGAGAG CAGCCATTTC
AGATTCCAAC AAGAGAAACA GAGTATTCTG TTGAATAAAT TAAAAGAAGC CATGCAGCTT
GTTTATCCTC AAGAGCATCC ATTAGTGTCA ATAGACGTAG AAGCATACGA GAGAAGTTTG
GGTAAAGTAA CAGAAATAGG AGTAGTCATC TACGATCCGC AGGTTCTGCC AGGGTCTGCG
GTGCCACTAC TAAAGCCTTA CCATATCATT ATTCAGGAGA ATCTCAAATT GGTCAATGGC
CGCTATGTTC CAGACAAGAA GGACCGGTTC ATGGGCGGCA CTTCTCATGT TCTTCGCAAG
AAAGATGCAG AGATGTTTGT GCTGGCCGTC ATAGAAAAGT ATATAAACGG TAGAAATGGA
GTATTGGTAG GGCACCACAT TGAAGGAGAT GTCAAATGGC TCCGAAGCAT AGGAGTTAAC
ATTAAGAATG ACACTGCTGT AGTTGACACG TTCAGGCTCT TTGCGATATC GAGATCAAGT
GGCGGAACAC TTCGTGGAGT GTTACGAGAG ATCAATGTAC CGCATGGAAA TCTCCATAAT
GCTGCGAACG ATGCCTACTA TACGTTAATC GCAGCCATGA CGTACTGTGA CCCACATCAT
CGACTTGAAA AGAACTTGGA CCAATTTGTC CACATGGAGA AGAAGCTGGC TGTGGATAAG
AAGATGGACT TGTTTTCAGA CAGAGCGACG TTCAGAAAGA CGACTGCAGA AGAATTGATC
CAGCTGCTTT GA
 
Protein sequence
MEDELLRIKQ LDLIRSKMQT VKDQSSRRDK MNEYLESSHF RFQQEKQSIS LNKLKEAMQL 
VYPQEHPLVS IDVEAYERSL GKVTEIGVVI YDPQVSPGSA VPLLKPYHII IQENLKLVNG
RYVPDKKDRF MGGTSHVLRK KDAEMFVSAV IEKYINGRNG VLVGHHIEGD VKWLRSIGVN
IKNDTAVVDT FRLFAISRSS GGTLRGVLRE INVPHGNLHN AANDAYYTLI AAMTYCDPHH
RLEKNLDQFV HMEKKSAVDK KMDLFSDRAT FRKTTAEELI QSL