Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_33957 |
Symbol | |
ID | 4841129 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009048 |
Strand | + |
Start bp | 865300 |
End bp | 868002 |
Gene Length | 2703 bp |
Protein Length | 900 aa |
Translation table | 12 |
GC content | 40% |
IMG OID | 640392444 |
Product | predicted protein |
Protein accession | XP_001386581 |
Protein GI | 150866851 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAGC AATCTCCACC TAGAACCAGA AGTACTTCGA CGCTGGCTTC GTCAGGTAAG CCGATGCTAG CAGAACGAAC TCACACAGGA CCTAATATGT CTCTACCACA TAAAGTATAT TCCAAGAAAC CCCTATCCAA AATGGAGAAC ATGAACCTCA ACGATACCAA GATGATTTCT AGTTTCAACA GTGATGGCAT TGAAAAAAAT GTTAGCCAAA TGATATGTGC TTTCTGCAAT GAACTTCTCT CGAGGTGTCT TCCTGGTGAA ATTGCAGTCA GCCTTACATG TGGGGATATG TGCCACAAGA CATGTTTTGG AGTGATGGTT GATCGGAAGC ACATGGATAG GAAACTTCAA TGCGGATTAT GTAGAAAGCA GACTTGGTGT ACCAATAACA ATCTCGTGGA AATGTTGGTT TCCTCGGTTG ATAACGAAGA TTTCGTGCTC AATACGAATC CAGACGAATC TTCTCAAGAT GGCAGCTCGA GAAACCAGTT TTCAACTCCC AGAACACACG AAGAATTCCC TGCTTTCACA AATCTTAACA ACGAACAAAG TAGACTCGAA ATCTATAAAC CACAGATAGA GCTTTCTTGT GACCCAAGAC CATTGGAACT TGGCCTGGAC AAAATACAAG ATTTCAAATG CGTGCTCACA GTTAAAGCTC CTCAGATCTT CCTGAAAAGT GATATAACCT CTGAAGATGT AAAATATAAA AACGACGTCG AGGCTGAAAT CTACAAATAT TTCCACAGTC AGATAAAGAA TTGGCAAGAA ACAGGGTTGG CCCCTAATCC GGACCAATTG GGTAATTTGG TAATGTTTGA TAACTTGTAT ATCAGCACGA ACGAAGTAGA ATGGGATATT GTCAAGGTAT TCTTGTTTTC CAAGATTATT TTGTTTTCTA GAAAAGATGA AATGATAGGT AAGATCATGA TAAGAGAGGA TATCAGCAGC ATAAATAAGT TCTCTGGAGG AATTATTCTT AATTTGAGAA ATGGAGCCAT CCCTGAGTTC TATTTTAGAC ACACCAACCC ATTAATCATT GCAAAATGGG AGTCAATAAT AATACAATAT TTCAAGTGGA ACAAATTAGA TCCTTTAAAC AGATTTCAAA TCACTACCAA TGCTTTCGAG ATTATTCCAA ATGTAGACTT TCCAGAAGAC GTACGAAATC TTGCAACTAT GATAGACGAA GATAGGGATA TCCCTTCGGA GTATTTCGCA AAATCTATTG CGTTACCTGA GCCATACCCC TTGAATTTGA TAATCTGTGT TCCATTGGCG AACTTATCGG GGCTACCAAA TTCAGAATAT AAAAGATTAA TCATCGATTT TCTCCATCAA ATAAGGCAGA GCCTTAGAGT CTTTGATAGA ATGGGGTTGG TGTTTACTGG CAGAGATGGT AATGGGAAGA TAGCAAACAA AGGGACATTT GTAAGTTGTA CTAACAAGTC CTGGACAGGG TGGGATAGAG TTCTTAATGA TGTTTTTGTT TATTCTGAAG GGGTGCCTTT CAGCAATGAA ACAGAGGAAT TAAAAGTCAC GATAGATAAG ATTGTAGATT TGAAGCCATT TGTTCTGAAC ACCTCCAATT TTGTTAATAA GGTTTTAATT TTGAACGGCA ACAACTACAG ACGGGAACAA TCAGTAAGCA ATCAGGGTGT CAATAAAATC ATTCTTCAAA AGAAGCTCAA CTCATTGTTA GAAAGATTTT CAATAACAAT ATTAAGAGTT GGAGGGTACA CGGAAAGTTT CACTACTTTC AATGAACTCA TAATGAACCC AAACGATGAC ATAGAGGCAG AGGAACTAGT CTTGTCATTT GGATCTAGCT TCTTTCGATT TGATTCATTT TCAGACTTGA ACGAAAGAAT TTCCTACATC ATGAACTGGA AGATTCAACA GACGTGTATT CCATCGATAA GAGTGGACAT ATCAAAATTT GAGCTCAATC AAAACTTGTT GAAATTCAAC GAGATCGAGA TAAATGGACT TATGAAAAAA TTGAACAAGG TTGAAGATAT TGTCTTGTTC GTCAAAGACA TCACTCCAGG CACTGAAAGA AACATAATAA TAGGGCTCCA GACGCTAACA CCTTGCAACA ACCGGCCACA ACTACCAGTG CAGGAAGAGG AAATGGCAAT ATTACAATAT ACTTCGTCGT GGATAACCAC TAGGGAGAAA ATGAAAATTT GCTACAAGAG GCTAGATGAT CGAAATCAAG GCACTCACCA TGAGAATATG GCCAGCAAAA AGATAGCTGA AGAGAAAGAG ACTCCACCAG CCGAATCAAC TTCACCACCT ATGCCAAGCT CGCCGCTCAC TTCCGAGAGT CTTGCAAGAC GCCAAATGGA ACTTTCGATT ATGGAGGCTT TACTGGATCA GAAGATAAGT CTACGAGACT ATCGAGACAA GATAAACAGA GCCATACATA TTGTACAAGG ATATACAGAA GGGAGTGGCG GTTCACCAGG GAGCAGCAGC CCAGCAGATA GCAGCAGCAG TTCACAAGGC TCCCGAAGGG GATTCTGTTG CAAAGGTAAC CTCGATCTCG ATCTCGAGAA AGTCAAGCTT CGTCGGTTCC GAGATAACTC CCAATATTCA GAGTATATCG CAAGACACTT GGAGAAGATT CGAGACCTTG ATGCATCTAA TGCAGCCCTA AAGTGTCAGG ATCTCCATTT GTCTCTAGAA TGA
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Protein sequence | MKKQSPPRTR STSTSASSGK PMLAERTHTG PNMSLPHKVY SKKPLSKMEN MNLNDTKMIS SFNSDGIEKN VSQMICAFCN ELLSRCLPGE IAVSLTCGDM CHKTCFGVMV DRKHMDRKLQ CGLCRKQTWC TNNNLVEMLV SSVDNEDFVL NTNPDESSQD GSSRNQFSTP RTHEEFPAFT NLNNEQSRLE IYKPQIELSC DPRPLELGSD KIQDFKCVLT VKAPQIFSKS DITSEDVKYK NDVEAEIYKY FHSQIKNWQE TGLAPNPDQL GNLVMFDNLY ISTNEVEWDI VKVFLFSKII LFSRKDEMIG KIMIREDISS INKFSGGIIL NLRNGAIPEF YFRHTNPLII AKWESIIIQY FKWNKLDPLN RFQITTNAFE IIPNVDFPED VRNLATMIDE DRDIPSEYFA KSIALPEPYP LNLIICVPLA NLSGLPNSEY KRLIIDFLHQ IRQSLRVFDR MGLVFTGRDG NGKIANKGTF VSCTNKSWTG WDRVLNDVFV YSEGVPFSNE TEELKVTIDK IVDLKPFVSN TSNFVNKVLI LNGNNYRREQ SVSNQGVNKI ILQKKLNSLL ERFSITILRV GGYTESFTTF NELIMNPNDD IEAEELVLSF GSSFFRFDSF SDLNERISYI MNWKIQQTCI PSIRVDISKF ELNQNLLKFN EIEINGLMKK LNKVEDIVLF VKDITPGTER NIIIGLQTLT PCNNRPQLPV QEEEMAILQY TSSWITTREK MKICYKRLDD RNQGTHHENM ASKKIAEEKE TPPAESTSPP MPSSPLTSES LARRQMELSI MEALSDQKIS LRDYRDKINR AIHIVQGYTE GSGGSPGSSS PADSSSSSQG SRRGFCCKGN LDLDLEKVKL RRFRDNSQYS EYIARHLEKI RDLDASNAAL KCQDLHLSLE
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