| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_33929 |
|---|
| Symbol | |
|---|
| ID | 4841015 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009048 |
|---|
| Strand | - |
|---|
| Start bp | 799525 |
|---|
| End bp | 800418 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640392330 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001386746 |
|---|
| Protein GI | 150866966 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.811114 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.542479 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTCTC AGATCCTTTT GACGGTCATC TTCTTTGCTT TAACTTATGG AGCTCCTGTT
GACCCTCTCG CTTCTAATCT TGCTGGTAAG GTGGTAGACA TATCAGGAGA ATATCCCATA
GTTTATGACT TTTCCCAGCT AGACTTAGTC CTAGGAGTAA AAGATCCTAT TGGAGAGTTG
GAAATGGCTT CCTTAGCAGG CGTAAACAAG GAACCTACAG TTGAAAGAAC AGATTCTGGA
ACCTACCAAA TATTGTATAA GACGAACAAT ATAAACGACC TAAAGAAACC CAAGTATGCT
CATCTTGCAG AAGACAAGAA TAATGCCTTC TACTTTGTGG ATACGGGATC TTCCATGTAT
TATGATGATC GAGAAGGTCA ATGGGTCGAG ATTCAAAAGA AAGATAAGAG TGCTGCTCCC
AAATTGAAAG AGGTACCCTA TCTGATTCCC GTTTCTGCTT GCATAGATAG TCGTTATGGA
AGTGGAGGCT CGGTTACTAA CCAATACTCC ATTTCTATTT CCATGTCCAA TTCTGCTGGA
ATTGGTGCAT CTATCAATTT CATGGCTCTT CCATTGGGTC TTTCCCTAAC AATTGCAACC
AAGGTGGCTA ACCTGTTATC TATTAGCGGA CTGTACACAT GTAATATAGG ACCCAAGCAG
TATGGTCAAC TACTGATTCT GCCCAAAATG GTGGAAGTTC CAGCCTTGAC CAGAAAGGGT
TATTACTTTG ACAAGATGGA CGGCTTCGTA GCCCTGAATC TGAAGCTCTC TGAGTTGGCT
AAGTTTAAGA TACTCAGTTT GTATCCTCCA ACCCACTACT GTATGGTGGA CACTACGCCA
AAGAAACTTC AATGTGCAGC TGCTCGTGGA GAAACCAAAT TCTTTGAGTA TTAG
|
|---|
| Protein sequence | MPSQILLTVI FFALTYGAPV DPLASNLAGK VVDISGEYPI VYDFSQLDLV LGVKDPIGEL
EMASLAGVNK EPTVERTDSG TYQILYKTNN INDLKKPKYA HLAEDKNNAF YFVDTGSSMY
YDDREGQWVE IQKKDKSAAP KLKEVPYSIP VSACIDSRYG SGGSVTNQYS ISISMSNSAG
IGASINFMAL PLGLSLTIAT KVANSLSISG SYTCNIGPKQ YGQLSISPKM VEVPALTRKG
YYFDKMDGFV ASNSKLSELA KFKILSLYPP THYCMVDTTP KKLQCAAARG ETKFFEY
|
|---|
| |