Gene PICST_33883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_33883 
SymbolHNT3 
ID4840961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp693284 
End bp694069 
Gene Length786 bp 
Protein Length261 aa 
Translation table12 
GC content38% 
IMG OID640392276 
Producthistidine triad superfamily, third branch 
Protein accessionXP_001386723 
Protein GI150866952 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.2179 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTTA GAGACGCCTT CCAGTCATAT ATAGACCATC CCGAGAAACA TCTGGACCTC 
GTTTTATACC ATGATGAGCA TGTCATTATT ATCCGAGATC TATTTCCCAA ATCCGTACGC
CATTATCTAG TGATCCCCAG ATCTACGGCA CTAACTCATG TACACCCCTT AGATGTCTTT
AATCGCAATT ACAAGGACTT CACTGGCGAG GAGTTATATG AGCTTATCGG AACATATGTG
GAAAAGGCCA AAGAGATGAT AATAGAAGAT ATAGACAAAT CCTTGGGCAA TCACCCCAAT
AACAAGTTGA AGCTAGCTGA ATTCAAGAAC AAGTTCATAA AGTCTGGAAT TCACTCCATT
CCATCTCTCA GAAACCTTCA CATACATGTC ATCACACAAG ACTTCTTTTC GACACGAATG
AAACACAAGA AGCACTACAA TTCATTCACT ACCAAATTCT TTGTCGAATT TGACAAGTTA
AATCCAAATT ACAATGCTGG CTACTGCAAA TTGAGGAGTG GAACATCTGA CAAGTATGAT
GACTATGATT CCGATTCAGT CCACTCCTCA GAATCGGATG AGGACGTTAT GGTAATAAAG
AATGTTCGTA ATGAAGCTGT GTTAAATGAC ATCATAAAAA GCACTCCTCT TCAATGTACA
ATATGTGGTG CTACATTTGG GAATAAGTTC CAGAAATTGA AAGAACACAT GGAAGAGGAA
TTCACTAAGA AATATAGTAG TTTTGAAGGT TATGATGTAA ACAAACTAAT CAAAAGTCAA
ATATAA
 
Protein sequence
MSFRDAFQSY IDHPEKHSDL VLYHDEHVII IRDLFPKSVR HYLVIPRSTA LTHVHPLDVF 
NRNYKDFTGE ELYELIGTYV EKAKEMIIED IDKSLGNHPN NKLKLAEFKN KFIKSGIHSI
PSLRNLHIHV ITQDFFSTRM KHKKHYNSFT TKFFVEFDKL NPNYNAGYCK LRSGTSDKYD
DYDSDSVHSS ESDEDVMVIK NVRNEAVLND IIKSTPLQCT ICGATFGNKF QKLKEHMEEE
FTKKYSSFEG YDVNKLIKSQ I