Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_33838 |
Symbol | |
ID | 4840923 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009048 |
Strand | - |
Start bp | 593837 |
End bp | 596504 |
Gene Length | 2668 bp |
Protein Length | 889 aa |
Translation table | 12 |
GC content | 37% |
IMG OID | 640392238 |
Product | predicted protein |
Protein accession | XP_001386707 |
Protein GI | 150866941 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG5244] Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0040379 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.128443 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGTTTG AGGTCGGCCA GAGAATTTTC GTGAAGGATG AACCCGGCGT TATTAAATTT TCTGGGCCTA CTCAGTTTGC TTCAGGGTTT TGGTTTGGGG TAGAACTCGA TCGTCCAGTA GGCAAGAATG ATGGCTCGAT AGATGGTGTC AGATACTTCG CAATTTCCAA AAGTAACTCA GGAAAGTATG GAGTCTTTGT TAGAGAGGCA ATGTTGTCAT CCGGACCCAA TACAGTTTCT CGTTCAGCTT CACCTTTGGC AGATTCACAT TTGCATGTAG TAATAGACAA ACTTCAGGTT AAGTTGAAAA CAGCCAGTCA AGAAATTCGA GACTACAAGG AGAAATTGAT ATTGCTAGAG TCCAAAAATT CAACGTTGGA GTCTCAATTG GAGATGCAAG CCACAGATCA CGATTTCTTG TTAAGTACAA AGGAAGCCTT GTCTCAAGAC TACAAGGAAT TGAAGTTGAA GTATGAAGAA CTCAAAACTG ACTTCGATCT CTTACAGGAA GAAGCGGAGT TGAATAAACA GCTCGAAAAG GAAATACTGG CCTTGCCGCC GGATTCAATA CGACTGGAGG ATACACAGAA GATCATGCTT AGAAACAAGC AGTTGGAGGC AGCTCTACTC AGTTTGCAGA CGATCACTGA TTCCAACGAG TTAAACATGA ACAAAGAGAT AAATCAATTG AAGTCAGAAT TGTCGGGACA TCAACTTCTG AGCAAAAACC TCGAAGACCT TCGAACCAAG CTCTCCCAAG CAGATTCAAC CATTGCATCA TTACAAGAAC AGTTGGATTC AGTACTAGAT CTTGAAAAGG TAGTTGAACA TTTGACAAGT CAAAATGAAG AATTGTCTCA AAAGGTTGTT AACCTTACAA AAACAGTGGA AGACTTGACT GAGATACATG AGTTGGATAA AAGTCTAGAA GAGAATCAAA AACATGTCGA AGAAGAGCTC AGAATAAGCT TAGCAAAGTT ACTGGATGTT GTAAGGCAAG ATAAAGGAGT AATCCAGGAT CTTGAAAATA AGAATAAATG GATGGAAGAT AAATTGAACC AATTGAAATC TATTGAAGTA TTTGAAACAG GACTGGATGA TTTGAGAAAT GAATTGGAAA CCTTCAAAGC CAGAATTGCA TCATTGTCAA CTTCCAGCAG ATCCGATAAA GTGAATGCTA AGATTTATTC TTTCAAGTTG GCCCAATTAC AAACAGCTGT TGGTTATGAT GCTTTTAGCC ATTTGGAATA TAGGAAAGTA TTGGACATAA TCCACTTGGC GAAGAGCTGT ATCTGCTACG TTGAATGCAT AGATGAGTCT ATTGAAAAAC AATTGAATAG AAGTATCAAT AGAGATCTTC GTATTCAATA TTCTAATGTG TTTGTTTCCC TTCTAGAAGT GATCATTACT CTCTTTGAGT ACAATTTCCA GGAACAGGTT CTTTCCTCTA AGCTTGACAA CTTCAATTCT GTGTTAGGCT CCATAGAATT ATGGTTGCTG GAATTTAATA ACAACGATGT TGAAAATGAT GACTTCTACT TTTCTAATGT CCAAAAGTTT ATTGCAGACA TTATAGACTT GATGAACTTT GAAAACAGAA TTAAATTTCA AAGCAAGATT CAATTTGAAT TTATATTGAA GTATGTTAAA GCTGAATGCC AAACGTTCAT TGACTTTCTT GAACTCGTCC TTGAAGACCA GCGATCAGAT GACTATGAAA CCCCGTTGAT GGTACTGTTA CACAATTTAT TGAAAGACTG TCGAAATACC CAAGTTTCCG CCAACAGCCA ATTGGCTAAA ATAGCTGAAC CAAAAGAATT GACAGATTTA CAATTCACGA ACATTACTCC AGATATACGA GACCCTCTTC AAAAAGGGAA AACAGGCGAT TTCTTTACTT TGACTCTTGC TAAATGTATA TCGAGTTCCA CTACTAGCAT CATCGATGAT ATTAAGCAAA ATGGTTTAGA ACCTTTGGCA GAAGAGCTTC AAAAGAATCT CGCCTCATAT CGAGCAATAA TTGAAACTGA CTTCAAAATT GAATTAATTC TAGGTAAAAG CATCTATGAA GAGTTAGAGT TACCGCTGTT GTCCTCAGAC CTGAAAGCTA TTGAAGAATC ATCTAGCGAT GATTTAAAGG AGGAGCTTAA TCAGGCTAGA AATACCTTGG CTGAAAAAAA TATGAGGATA AATGAGTTTC AACTTAACAT CAAGTTACTT GAAAGAAATA TGGAATCTTT GAATGAAAAG TATATAGAAA AGATTTCACA TCTCAAGAGT ACGATAAGTC AACTCGAAGA AGACCATAAT ACAAGCATTA AACGAATCGA AGAGTTGATG CATTCAAATG AGAAACTTGA GAAAGAGGTT CACAAATTAC TTCAGGTTAA ACAAGAGTTT GATTTTCATG GAAAGTATAC TACTTTGAAG TCTGAGAATC AATCAATAGA TAGACTTGCA TTAATGGAGG AAATATTGTT ATTGAGGAAG ATTACTGATC AGATGTACTC TCGTCAAGTT GAAGAAGAAA ATGAACTATC GTGGCTAGAT GTTCCACTCA TATATCGATC TAATAATACT CCATCTGGTG ATAATCTCAA TCACGTTGGA AGACATTTGC AACACCTTTC TGGAGAAGCA AAGTTCATAA GATTGCCTTC GTCTAGCG
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Protein sequence | MVFEVGQRIF VKDEPGVIKF SGPTQFASGF WFGVELDRPV GKNDGSIDGV RYFAISKSNS GKYGVFVREA MLSSGPNTVS RSASPLADSH LHVVIDKLQV KLKTASQEIR DYKEKLILLE SKNSTLESQL EMQATDHDFL LSTKEALSQD YKELKLKYEE LKTDFDLLQE EAELNKQLEK EISALPPDSI RSEDTQKIML RNKQLEAALL SLQTITDSNE LNMNKEINQL KSELSGHQLS SKNLEDLRTK LSQADSTIAS LQEQLDSVLD LEKVVEHLTS QNEELSQKVV NLTKTVEDLT EIHELDKSLE ENQKHVEEEL RISLAKLSDV VRQDKGVIQD LENKNKWMED KLNQLKSIEV FETGSDDLRN ELETFKARIA SLSTSSRSDK VNAKIYSFKL AQLQTAVGYD AFSHLEYRKV LDIIHLAKSC ICYVECIDES IEKQLNRSIN RDLRIQYSNV FVSLLEVIIT LFEYNFQEQV LSSKLDNFNS VLGSIELWLS EFNNNDVEND DFYFSNVQKF IADIIDLMNF ENRIKFQSKI QFEFILKYVK AECQTFIDFL ELVLEDQRSD DYETPLMVSL HNLLKDCRNT QVSANSQLAK IAEPKELTDL QFTNITPDIR DPLQKGKTGD FFTLTLAKCI SSSTTSIIDD IKQNGLEPLA EELQKNLASY RAIIETDFKI ELILGKSIYE ELELPSLSSD SKAIEESSSD DLKEELNQAR NTLAEKNMRI NEFQLNIKLL ERNMESLNEK YIEKISHLKS TISQLEEDHN TSIKRIEELM HSNEKLEKEV HKLLQVKQEF DFHGKYTTLK SENQSIDRLA LMEEILLLRK ITDQMYSRQV EEENELSWLD VPLIYRSNNT PSGDNLNHVG RHLQHLSGEA KFIRLPSSS
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