| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_33593 |
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| Symbol | |
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| ID | 4840756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009047 |
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| Strand | - |
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| Start bp | 1055288 |
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| End bp | 1058566 |
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| Gene Length | 3279 bp |
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| Protein Length | 1092 aa |
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| Translation table | 12 |
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| GC content | 40% |
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| IMG OID | 640392071 |
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| Product | hypothetical protein |
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| Protein accession | XP_001386394 |
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| Protein GI | 150866713 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5271] AAA ATPase containing von Willebrand factor type A (vWA) domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.271146 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAACA CCGTATTGGA CTACTTTCTC AAGTTGCACA TTTTCAATCT GGAGGTGAAT
ATTGCCGATC TCGTGGATAT GGCCGTTCAG TTCCAGCGGA TGTTTGAGCT ATCGTTATTG
CCAGAAGACA AGGCAAGACT ATACGACGTT ATCTCGGGAA AATGCGCTTC TTTCAACAGC
TACAGTCTGG AAGATGCTAT TCTCACTCCA CAAGGGGAAT ACAGGCGATT GAATGAGTTC
TTCAAGAACT ACTCACCAAA CGATACGTAT TACTTCGACG AGATACACAT CAATGTCGGA
TCGAAGAACT TCACGGTCTC TGTCTCGGGA AATCTTTCTG CCTCTGGCTT CTTAGATCCG
CTTGTAGTCT CCAATTTACC TCTGAAAAGC TTCAATTACT ACCCTACAGG GTTGTTGAAC
TCGACACATT TACATGCGTA CTTGGCCCGT ATCAACCTCC AAATGAGACT TCGTGGCCAG
AAGATCCTTT TGGTACTCCA CAACAACGTA GTCGTAGACA GTCGCCAGTT CTCCAATATA
GAATTGTTGT ACATCAGCCC AGAAGTAGAC AAGTACTTCC AGAATAATCC AGACAATTGC
ATTAAGTTTC CCGACGAATA TGGACTAAAG TCGTGGATTA GATCCCACAT CATCGACCGG
TTGTCGAAGT TGAAGACTTT CGATAATCCA CTGCTATTGA TCAACTCCAT ATTGTACTCA
TATAGCACTT GCATCTCCAA ACTCTTACAC GATCCTCTAT ATTTCCAGTT CAACCAGTTG
AACTTGATGT CTTCGAACTT TATGGGAAAC AACATGCCTG CCCCTTACTA TGTAAATGAA
AACATCAAGA TAACGGATGG TAACCTCATA GTCATGGATG AAGCCCCTGA AATAGGCCAA
TACTCGGCCA GAGAAGACAA TTTTAAAAAG CTCAACAATT ACAATTACAA CGTAAAAGAT
ATCTACTTCA TTCTTTCAAG TCTTTTACTG TATCAAAATT CTGATATCGG CCATGATTAC
GGTTTTGATG CTAAAGAAAT AATGGACTTC CTCGTGCAAA AAGTACATCC TTTCTTGATA
CAGAGAGAGT TCCCCTTTGT TGGCCATTTC CATCGCTTTT TGGATGAATT CATTAACGAG
TATGCTAGAA TAGGTGCTTC AGACGATACA GATGAAACTG ATAATGCATT TAGCGTGTCG
GAGAAATTCC ATCTTGGTCC ATTGCAAGAA GCAGCCAGAA TTGAGAAAAT TTTGGTATCT
GCTTTTGATC AGGATGGTGA CAACTTAGCC TCGATGCTGT TTCCTCACAT AGATTCTATT
GAAGTGGCCA ATTCTGAAGC ATCCTTCTTG AAGGCTTCTG CTCGTAACCT TTCCAATGGA
AATAGTTTGC CTTTACCAAC TTTAGACGAG TATGATATGT TCACTCCAAA GAAAAGAAGA
AGCCTGACAA ATTCAATTCC TACCATCAAG AAGTCAAAGA TCATTGAAAT AATGAAAAAA
GACAAGTTGA GTTTTGTGAA CTCCGCTCAG GGCTCTGTTT TTTCAGACGA CTCTGATTAT
TCAGAAGATT CATTTTCTAG CAAGATAAAG CAATTCAAAG ACAAGGTGGA TTCAAATGGA
CTGGTACTTA GTCAAAATGG AAACGGTAAA GTCGTTGAAG AGAACGATGC AAATGCTTAT
GAGAACGAAA AATCAGGAGA TGAAGATGAA GAGTCTCTGG AAGAAGAGAA CGATTCTGCG
AAAGAAGAAG AACGTAAAGA TGATGATCGT GAAGAGTATT ACATGCACCG AGAACTAATC
AACCCTGTAG GCGGTGATGA GAATGGGGAC ATTGAAGAAG AAGTATATGG TCAAGATGAT
GACATTGAAA TGGAAAAGGT GCAACAAGAA GAAACAATCA GTATACAACC AGAAGCGAAA
GCATCCTCTA TTCAGATGGA AGTTGAGCCA AATAGCACTG AAGAATCGTC TAACTCAGAT
AGCAACAGTT CTTCCGATAG CAATGAAGTT GCAGACTCAA ATAATGGAGA GAAAACATAT
ATTAAGGAAG CCCATATGAA TGAACCTACT TCTAGGGAAG ACAATCCTAG CGATAGTTCC
GAATCTCAAT CTTCAGATTC CAGTGAATCA GATGCAGAAG ACAGCGCAGA AGAAGAAGAA
ACACACCCAG AGTCAAATTC TAAAGTTCCA TTATCTTCTT CAACAATATC TCCATCTCAA
CTTCCAATTC CAGTTCCGAA TCCAGTTCCG GCTCCAGTCA AGACGAGCTC AATTTCTGCA
ACTCCTTCAA CGCAGATTAA GTTACCAAGG AGGTCATTGG GAACTTTATC TTCGTTGGTT
CCGCCTAAAT CTACAGTTGA ATCCAAAGAT ACGCCTAAGA CAAATTCTGA TAGGTCCAAA
TTCAAGGGAA AGCTTGATTT CAGTTCAGAT GACTCTTTTT CTTCTGTAGA CAGCGATAGT
TCAGATGAGT CTAATGATGA TAGAAACGTA TCACAGCTAG CACAAGTTAA AGTTACGTCA
ACCAAAGCTG TACCAAAGAC AGATTCTACA AAATCAACAA CTATTACAAA TACAATACGT
TCAAAACCTT CTTCTATTCC AGCAAATTCA ACAGCCCTTA CGAAACATAT ATCTACGAAG
GCTGTACTTT CTAAACCAGT TCTGCCGTTG TTAAAAAAGG TATTAGATGC GGGACTGAGT
CGTGATCCAA AATTGGCACC ATCGGCAATT CTTGAACATG TTTCCAAGCC TAAAGAAAAG
AGAATAAACC CAAGTCAATT AAAGAGTATT GAAAGAAGAC AATATGATTC TTCGTCAGAG
GACGAAATGT CGGATCCTAT AAACGAAAGC TCTGACGAAT CGGAAGACGA ACTCTTTGGT
ACTCTGCCGA ATGTTTCTAC TCTGACTCAA CGTACGCAAA CACAAAATCT GACTCAAATT
CAGATTCAAA CATCGAATTC TACTACAAAA TCTCCTGTTA GGAAACCAGG CAGTCCATTA
CAATTTAGCT TTGATAGAAA TTCTCCTGGT CAAAGTGCAT TATCACCTCG TGAAAAGTTA
CAATTCTCGT CACAGTCGAC TCCAGCATCG GCTGGAAAAG GTAGACCTAC AATTCTATCA
ATGAAGTTGA AGGAACTCGA AGCACGCCAA GCAAGTCCAT CGAAGAAAGA AATACCTAAA
AAGGGCCAAA GGCAAACCTC TCAAGCAAAG GAAAGGCAAT TATCGGCATC TGATTCTGAT
AGCAGCTCTG AAGACTCAGA CGATTCGATC GGATTCTAA
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| Protein sequence | MANTVLDYFL KLHIFNSEVN IADLVDMAVQ FQRMFELSLL PEDKARLYDV ISGKCASFNS
YSSEDAILTP QGEYRRLNEF FKNYSPNDTY YFDEIHINVG SKNFTVSVSG NLSASGFLDP
LVVSNLPSKS FNYYPTGLLN STHLHAYLAR INLQMRLRGQ KILLVLHNNV VVDSRQFSNI
ELLYISPEVD KYFQNNPDNC IKFPDEYGLK SWIRSHIIDR LSKLKTFDNP SLLINSILYS
YSTCISKLLH DPLYFQFNQL NLMSSNFMGN NMPAPYYVNE NIKITDGNLI VMDEAPEIGQ
YSAREDNFKK LNNYNYNVKD IYFILSSLLS YQNSDIGHDY GFDAKEIMDF LVQKVHPFLI
QREFPFVGHF HRFLDEFINE YARIGASDDT DETDNAFSVS EKFHLGPLQE AARIEKILVS
AFDQDGDNLA SMSFPHIDSI EVANSEASFL KASARNLSNG NSLPLPTLDE YDMFTPKKRR
SSTNSIPTIK KSKIIEIMKK DKLSFVNSAQ GSVFSDDSDY SEDSFSSKIK QFKDKVDSNG
SVLSQNGNGK VVEENDANAY ENEKSGDEDE ESSEEENDSA KEEERKDDDR EEYYMHRELI
NPVGGDENGD IEEEVYGQDD DIEMEKVQQE ETISIQPEAK ASSIQMEVEP NSTEESSNSD
SNSSSDSNEV ADSNNGEKTY IKEAHMNEPT SREDNPSDSS ESQSSDSSES DAEDSAEEEE
THPESNSKVP LSSSTISPSQ LPIPVPNPVP APVKTSSISA TPSTQIKLPR RSLGTLSSLV
PPKSTVESKD TPKTNSDRSK FKGKLDFSSD DSFSSVDSDS SDESNDDRNV SQLAQVKVTS
TKAVPKTDST KSTTITNTIR SKPSSIPANS TALTKHISTK AVLSKPVSPL LKKVLDAGSS
RDPKLAPSAI LEHVSKPKEK RINPSQLKSI ERRQYDSSSE DEMSDPINES SDESEDELFG
TSPNVSTSTQ RTQTQNSTQI QIQTSNSTTK SPVRKPGSPL QFSFDRNSPG QSALSPREKL
QFSSQSTPAS AGKGRPTILS MKLKELEARQ ASPSKKEIPK KGQRQTSQAK ERQLSASDSD
SSSEDSDDSI GF
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