Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_33566 |
Symbol | |
ID | 4840551 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009047 |
Strand | - |
Start bp | 974745 |
End bp | 975563 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 12 |
GC content | 40% |
IMG OID | 640391866 |
Product | predicted protein |
Protein accession | XP_001386376 |
Protein GI | 150866698 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.578635 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCTTT CTCTCCTCAC ATACAATACA AAACATCTTG CTACGATATG TGCAATACTA TCGAAACGCC TATCTGCATT TGTAACCAAG AAGGAACTCA AGCGATCAAA TACTACTAAG CCTCTGGAAT ATACTGGAAA TATTTCTTCG TCGAAAATGA AAAGATCGAG TTCGCTTCCT GTTATCTCAG ACCATTCAGA AAAGAACGAT GTTGTATTGC TTAAGACCCT TACAGTAATT CTTTACTTGG TACAAAACGG CTCTTACGAC TTTGTCAATT GGGTTAGGGG TAATATCGAT AACTACATTT TCCCGTTGTC CACAGTGGCC CCCGTCTATG GAAAGCACTA TGATGCGATC GCGTCCAAAG TAGCCAAACT ATTGCTTTTA TTCACAGACT CTGAACAGCT CAAAGCTTTC AGGGTTAATA TCCATATTCT TCGTTCAGAT ATGACGACCC CAGGTGTAAA GCGTACTTCC ATAGACTTGC CCAGTAATAT CACCACAGAA GAGATGGAAG TGGATCACAA TATTTATTCG AAACGTGCGA AATCAATGGA TATCAACAGA AATACCAATA ATACATTGAC TACATTAGTA GAGGAAACCT TCGAGAATGG CCAGCTGTTC AACGTGACTG CAGATCCCTA TATAAGGAAT TCGAGACTGG ACTATCAACT TGGATCTGGG AGTGATAGAT ATGATAATTC AGGTAGACCA AAACCAGCGT ATGCCATAGA TCTGTACATA CCAATGGGTA CGACTGATTC TTCGAACCTG AATTACGAAG TCGTTGATAA AGATACAGTC TTTATTTAA
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Protein sequence | MELSLLTYNT KHLATICAIL SKRLSAFVTK KELKRSNTTK PSEYTGNISS SKMKRSSSLP VISDHSEKND VVLLKTLTVI LYLVQNGSYD FVNWVRGNID NYIFPLSTVA PVYGKHYDAI ASKVAKLLLL FTDSEQLKAF RVNIHILRSD MTTPGVKRTS IDLPSNITTE EMEVDHNIYS KRAKSMDINR NTNNTLTTLV EETFENGQSF NVTADPYIRN SRSDYQLGSG SDRYDNSGRP KPAYAIDSYI PMGTTDSSNS NYEVVDKDTV FI
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