Gene PICST_33566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_33566 
Symbol 
ID4840551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009047 
Strand
Start bp974745 
End bp975563 
Gene Length819 bp 
Protein Length272 aa 
Translation table12 
GC content40% 
IMG OID640391866 
Productpredicted protein 
Protein accessionXP_001386376 
Protein GI150866698 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.578635 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCTTT CTCTCCTCAC ATACAATACA AAACATCTTG CTACGATATG TGCAATACTA 
TCGAAACGCC TATCTGCATT TGTAACCAAG AAGGAACTCA AGCGATCAAA TACTACTAAG
CCTCTGGAAT ATACTGGAAA TATTTCTTCG TCGAAAATGA AAAGATCGAG TTCGCTTCCT
GTTATCTCAG ACCATTCAGA AAAGAACGAT GTTGTATTGC TTAAGACCCT TACAGTAATT
CTTTACTTGG TACAAAACGG CTCTTACGAC TTTGTCAATT GGGTTAGGGG TAATATCGAT
AACTACATTT TCCCGTTGTC CACAGTGGCC CCCGTCTATG GAAAGCACTA TGATGCGATC
GCGTCCAAAG TAGCCAAACT ATTGCTTTTA TTCACAGACT CTGAACAGCT CAAAGCTTTC
AGGGTTAATA TCCATATTCT TCGTTCAGAT ATGACGACCC CAGGTGTAAA GCGTACTTCC
ATAGACTTGC CCAGTAATAT CACCACAGAA GAGATGGAAG TGGATCACAA TATTTATTCG
AAACGTGCGA AATCAATGGA TATCAACAGA AATACCAATA ATACATTGAC TACATTAGTA
GAGGAAACCT TCGAGAATGG CCAGCTGTTC AACGTGACTG CAGATCCCTA TATAAGGAAT
TCGAGACTGG ACTATCAACT TGGATCTGGG AGTGATAGAT ATGATAATTC AGGTAGACCA
AAACCAGCGT ATGCCATAGA TCTGTACATA CCAATGGGTA CGACTGATTC TTCGAACCTG
AATTACGAAG TCGTTGATAA AGATACAGTC TTTATTTAA
 
Protein sequence
MELSLLTYNT KHLATICAIL SKRLSAFVTK KELKRSNTTK PSEYTGNISS SKMKRSSSLP 
VISDHSEKND VVLLKTLTVI LYLVQNGSYD FVNWVRGNID NYIFPLSTVA PVYGKHYDAI
ASKVAKLLLL FTDSEQLKAF RVNIHILRSD MTTPGVKRTS IDLPSNITTE EMEVDHNIYS
KRAKSMDINR NTNNTLTTLV EETFENGQSF NVTADPYIRN SRSDYQLGSG SDRYDNSGRP
KPAYAIDSYI PMGTTDSSNS NYEVVDKDTV FI