Gene PICST_33564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_33564 
Symbol 
ID4840607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009047 
Strand
Start bp970006 
End bp971231 
Gene Length1226 bp 
Protein Length408 aa 
Translation table12 
GC content40% 
IMG OID640391922 
Productpredicted protein 
Protein accessionXP_001386374 
Protein GI150866697 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTCA AGAACTTATT CAGAAAGAAA GAACCATCCG AGCAGGAATT GAGAGATGAA 
CTTAGAGGGG CCGGAATCAT GACCAGCACC AGCGGAAGAA AGCAAGAGCA TTTTGGCCAG
TTTAGATTCT CTAGCCAGAG AAATGATTCA AATCCATATT CTTCGATAAA CACTACTTCG
TCCACGAAAC CATACACTCA AACCAGTTCC TTTTTCACTA ACACTACTCG AGGAAGTCTG
TACACGTATG GAAGCGTTGA AAATAGCCGT ATTCCTACTA CTAGCAGAGA AGGATATACT
CCCCCAGTAG CTAGGAGTAA TAGCGACCCA TATGGAATTG CCACAAGTTG GACCAGCCCA
ACAGTTTCTC AGCAATCAGC CACGTATAGA GACCAACATA CTGTGGACCT CAACGAGCTT
CCTACAGATA TGTCGAATCT TCGGAAGAAG AAAAAGTCTA CACGTCGTCC TCCAAAAGGT
GACGACCCAG ATCTCAATTC TGTTTCTCGA AGAGTGGAAG TTGACTTGAA CGAAGATCCA
AATGATGTTG AAGTACAAAC GGAAGAAACA ATGGATTTAG AAGAGAAGGA GATACGCTCA
ACCAAAGAGG AGATTAAATT TGTGAGGAAG GAATCTCTCT TTTCTACTAA GACGACCTTG
AATATGGCAA AACAAGCTGA CGATTCAGCA ACAAATACTA TGAAAATATT GGATTCACAA
TCCGAAAAGT TATACAACAC CGAGCAGAAT TTGATGTTGG CAGATGTTCA GAATAAGATT
GCTAACGAAA AGGCTAAAGA GCTCCATAGA TTGAACCGTT CCATATTCAT ACCCGCTTAT
GGTTTCAACC AAAAGAAGAG CCTTGCGGAG CAGGAACAAA GAATTAAGAG CTTCAACGAA
CAAGGTAAAC CTTCTCAGGA AGAAACCCCA AATAACATAA AGGGAAATTC AGACAGACTC
AAGAATGATA TCAGTAGAAG TCTTTCATTC GAACATGGAA GAAGGAAACC TTTATCACCC
AGATATCAAT TTGAAAATGA ATCTGAAGAT GACGAAATGG AACAGCAAAT CGAGGACAAT
TTGGAGCAAA TTGATTACTT TTCTCGAAAA TTGAGCAAAT CTGCTTCAGT AATTGGACAA
GAAATGGATT CCCAAAATGC TACATTGGAA GTCCTCGAAC AAAATGCTGA CATTGTTGAC
TCCAATATAT TGAGAAATAC AGAAAA
 
Protein sequence
MALKNLFRKK EPSEQELRDE LRGAGIMTST SGRKQEHFGQ FRFSSQRNDS NPYSSINTTS 
STKPYTQTSS FFTNTTRGSS YTYGSVENSR IPTTSREGYT PPVARSNSDP YGIATSWTSP
TVSQQSATYR DQHTVDLNEL PTDMSNLRKK KKSTRRPPKG DDPDLNSVSR RVEVDLNEDP
NDVEVQTEET MDLEEKEIRS TKEEIKFVRK ESLFSTKTTL NMAKQADDSA TNTMKILDSQ
SEKLYNTEQN LMLADVQNKI ANEKAKELHR LNRSIFIPAY GFNQKKSLAE QEQRIKSFNE
QGKPSQEETP NNIKGNSDRL KNDISRSLSF EHGRRKPLSP RYQFENESED DEMEQQIEDN
LEQIDYFSRK LSKSASVIGQ EMDSQNATLE VLEQNADIVD SNILRNTE