Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_33564 |
Symbol | |
ID | 4840607 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009047 |
Strand | - |
Start bp | 970006 |
End bp | 971231 |
Gene Length | 1226 bp |
Protein Length | 408 aa |
Translation table | 12 |
GC content | 40% |
IMG OID | 640391922 |
Product | predicted protein |
Protein accession | XP_001386374 |
Protein GI | 150866697 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACTCA AGAACTTATT CAGAAAGAAA GAACCATCCG AGCAGGAATT GAGAGATGAA CTTAGAGGGG CCGGAATCAT GACCAGCACC AGCGGAAGAA AGCAAGAGCA TTTTGGCCAG TTTAGATTCT CTAGCCAGAG AAATGATTCA AATCCATATT CTTCGATAAA CACTACTTCG TCCACGAAAC CATACACTCA AACCAGTTCC TTTTTCACTA ACACTACTCG AGGAAGTCTG TACACGTATG GAAGCGTTGA AAATAGCCGT ATTCCTACTA CTAGCAGAGA AGGATATACT CCCCCAGTAG CTAGGAGTAA TAGCGACCCA TATGGAATTG CCACAAGTTG GACCAGCCCA ACAGTTTCTC AGCAATCAGC CACGTATAGA GACCAACATA CTGTGGACCT CAACGAGCTT CCTACAGATA TGTCGAATCT TCGGAAGAAG AAAAAGTCTA CACGTCGTCC TCCAAAAGGT GACGACCCAG ATCTCAATTC TGTTTCTCGA AGAGTGGAAG TTGACTTGAA CGAAGATCCA AATGATGTTG AAGTACAAAC GGAAGAAACA ATGGATTTAG AAGAGAAGGA GATACGCTCA ACCAAAGAGG AGATTAAATT TGTGAGGAAG GAATCTCTCT TTTCTACTAA GACGACCTTG AATATGGCAA AACAAGCTGA CGATTCAGCA ACAAATACTA TGAAAATATT GGATTCACAA TCCGAAAAGT TATACAACAC CGAGCAGAAT TTGATGTTGG CAGATGTTCA GAATAAGATT GCTAACGAAA AGGCTAAAGA GCTCCATAGA TTGAACCGTT CCATATTCAT ACCCGCTTAT GGTTTCAACC AAAAGAAGAG CCTTGCGGAG CAGGAACAAA GAATTAAGAG CTTCAACGAA CAAGGTAAAC CTTCTCAGGA AGAAACCCCA AATAACATAA AGGGAAATTC AGACAGACTC AAGAATGATA TCAGTAGAAG TCTTTCATTC GAACATGGAA GAAGGAAACC TTTATCACCC AGATATCAAT TTGAAAATGA ATCTGAAGAT GACGAAATGG AACAGCAAAT CGAGGACAAT TTGGAGCAAA TTGATTACTT TTCTCGAAAA TTGAGCAAAT CTGCTTCAGT AATTGGACAA GAAATGGATT CCCAAAATGC TACATTGGAA GTCCTCGAAC AAAATGCTGA CATTGTTGAC TCCAATATAT TGAGAAATAC AGAAAA
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Protein sequence | MALKNLFRKK EPSEQELRDE LRGAGIMTST SGRKQEHFGQ FRFSSQRNDS NPYSSINTTS STKPYTQTSS FFTNTTRGSS YTYGSVENSR IPTTSREGYT PPVARSNSDP YGIATSWTSP TVSQQSATYR DQHTVDLNEL PTDMSNLRKK KKSTRRPPKG DDPDLNSVSR RVEVDLNEDP NDVEVQTEET MDLEEKEIRS TKEEIKFVRK ESLFSTKTTL NMAKQADDSA TNTMKILDSQ SEKLYNTEQN LMLADVQNKI ANEKAKELHR LNRSIFIPAY GFNQKKSLAE QEQRIKSFNE QGKPSQEETP NNIKGNSDRL KNDISRSLSF EHGRRKPLSP RYQFENESED DEMEQQIEDN LEQIDYFSRK LSKSASVIGQ EMDSQNATLE VLEQNADIVD SNILRNTE
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