Gene PICST_33561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_33561 
SymbolDRS2 
ID4840604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009047 
Strand
Start bp958705 
End bp962094 
Gene Length3390 bp 
Protein Length1129 aa 
Translation table12 
GC content43% 
IMG OID640391919 
Productmembrane-spanning Ca-ATPase (P- type) 
Protein accessionXP_001386197 
Protein GI150866555 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0474] Cation transport ATPase 
TIGRFAM ID[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01652] phospholipid-translocating P-type ATPase, flippase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCATT CGGCCAACTC ACACTATGGC TATTTTGGAA ACCATATCTC TACGACCAAG 
TACAACTTCG CTACATTCAT ACCGAAGTTC TTGTTTGAGC AATTCAGCAA GTACGCGAAC
TTGTTCTTTC TCTTTACATC GATTATCCAG CAAGTTCCCA ACGTTTCTCC GACTAACAGG
TACACAACAA TTGGGACATT GACTGTAGTT TTGCTTGTTT CTGCCATCAA AGAAATCTCT
GAAGATATCA AGAGAGCTAA TGCGGACAAG GAGTTGAACA ATACGAAAGT TTTGGTGCTA
GACTCGCAGA CTGGTTCGTT TGCGTTGAAG AAGTGGATTC AAGTTCAAGT AGGTGACATT
GTAAGAGTAG ATAATGAGCA GCCTTTCCCA GCCGATTTGC TTCTTTTGAG CTCTTCAGAA
CCCGAAGGCT TGTGCTACAT TGAAACAGCA AACTTGGATG GTGAAACCAA CTTGAAAATC
AAACAGGCTC TTGAAAACAC AGCGTATCTT GTAAATCCAC GTGACTTGGT CAGCGATATG
TCCAAGTCTG AGATCATGTC TGAGCCTCCT AACTCGTCAT TATACACCTA TGAAGGTAAT
TTGAAGAACT TTGGATCCAA CGGAGACATC CCCTTATCGC CCGAACAGTT GTTGTTGAGA
GGTGCCACGT TGAGAAACAC CCAGTGGATT CATGGGGTTG TAGTCTTCAC AGGACACGAG
ACCAAGTTGA TGCGTAATGC CACGGCGACA CCTATCAAGC GAACTGATGT TGAGAGAATC
ATCAACTTGC AGATCGTAGC ACTTTTTTGC ATTTTGATCT TCTTAGCCTT GGTTTCGTCT
ATAGGCAATG TAGTCAAGAT CCAAGTCAAT AGTTCTAGCT TGAGCTATTT ATATTTGGAA
GGGGTCAGTC GCGCCAGATT GTTTTTCCAG GGTCTTTTGA CGTACTGGAT CTTGTTCTCG
AACTTGGTTC CGATCTCATT GTTTGTCACA GTAGAAATCA TCAAGTACTA CCAAGCCTTT
ATGATAGGTA GTGATCTTGA CATGTACTTC CCGGACACAG ACACTCCTAC AGGGGTGAGA
ACATCGTCTT TGGTAGAAGA GTTGGGTCAG ATTGACTACA TTTTCAGTGA CAAAACAGGT
ACATTGACAA GAAACATAAT GGAATTCAAG AGTTGCACCA TTGGAGGCAG ATGTTACATT
GACGAAATCC CCGAAGATGG ACAGGCTCAA GTGATAGATG GAATCGAGAT AGGCTACCAT
ACCTACGATC AGATGCAAAG AGAGTTGTTA GACACCTCTC TGCAGCATTC CGCCATCATT
AATGAGTTCT TCACTCTCTT AAGTACCTGT CATACTGTAA TTCCAGAAGT AGACGATACT
ACTGGACACA TCAAGTACCA GGCAGCTTCC CCAGATGAAG GTGCGTTGGT TCAGGGTGCG
GCTGATTTGG GTTATAAGTT TATAATTCGT AGACCCAAGG GCGTAACCAT TGAGAATACT
ATCACGCTGG TGAAGTCTGA GTATGAGTTG TTGAACATTT GTGAGTTCAA CTCTACCAGA
AAGAGAATGT CGGCTATTTT TAGATGTCCA GATGGTATCA TCAGACTATT CTGCAAAGGT
GCTGACACTG TCATCTTGGA AAGATTGTCT CAAGATGAAC CTCAGCCATT TGTAGATGCT
ACTTTACGTC ATTTGGAAGA TTTCGCAGCT GAAGGGTTAA GAACGCTCTG TATAGCTTCT
AGAATTGTCT CAGACGAGGA GTACCAGAAT TGGGCTAGCC AGTATTATGA AGCTTCTACC
TCTTTAGACG ATAGAAGTGG CAAGTTAGAC GCAGTTGCTG AGTTGATAGA GACTGGTTTA
TTTTTGTTGG GTGCCACGGC TATCGAAGAC AAGCTCCAGG ATGGTGTACC AGAGACTATA
AGCACGTTAC AGACTGCTGG GATCAAGATC TGGGTCTTGA CTGGTGACAG GCAGGAAACT
GCCATCAACA TTGGTATGTC ATGTAAGCTT TTGAGTGAAG ATATGAACTT GTTGATTATC
AATGAGGAAA CTAAGAGCGA CACCAGACTA AACTTGCAAG AGAAGTTGAC TGCTATCCAA
GACCATCAGT TCGAAATGGA TGAAGGAGCC TTGGAATCCT CTTTGGCTTT GATTATCGAT
GGTCACTCGT TGGCATTTGC GTTAGAGCTG GATTTGGAAG ACTTGTTCAT AGACCTTGGT
TCCCGTTGTA AAGCAGTCAT CTGTTGTCGT GTGTCGCCGT TACAGAAAGC TTTGGTGGTT
AAGATGGTCA AGAGAAAGAA GAAACAGTCT TTATTATTGG CTATTGGAGA TGGTGCTAAC
GATGTTTCTA TGATCCAGGC TGCTCACGTT GGTGTAGGAA TCAGTGGTAT GGAAGGTATG
CAGGCTGCTA GAAGTGCTGA TATCTCTATT GGTCAGTTCA AGTTTTTGAA GAAGTTGTTG
TTGGTTCATG GTTCATGGTC ATACCAACGT ATTTCCAACG CTATCTTATA CTCGTTCTAT
AAGAACATCA CTTTGTACAT GACTCAGTTC TGGTTTGTTT TCACTAATGG TTTCTCGGGA
CAATCTCTTA TTGAGTCTTG GACGTTAACC TTCTACAACG TTTTCTTCAC TGTATTCCCG
CCTTTCGTGT TGGGTGTGTT TGACCAGTTT GTCAGTGCTA GATTGTTGGA TAAGTATCCT
CAATTGTACC AGTTAGGAGT ACAGAGAAAG TTTTTCAATG TGACTATCTT CTGGGGCTGG
ATCATTAATG GGTTCTACCA CTCCGCCCTC ATTTTCTTGT GTTCTTTCTT CATCTATAGA
TTTGGAAATG TGCTTCCTAC TGGTTTGATT GCTGATAACT GGACTTGGGG TACGGCTGTA
TTCACCACTT GTACCTTAAC TTCTTTGGGT AAGGCAGCAC TAGTAGTGAC AATGTGGACC
AAGTTCACGT TAATCGCCAT TCCTGGCTCG TTTTTGTTCT GGTTGGCCTT CTTCCCAGCT
TATGCAAGCA TTGCTCCAAA CATCAATGTT TCTCAGGAGT ATAGAGGTGT TTTGCGGGCG
ACTTACCCTA CCATAGTGTT CTGGTCGATG GTGTTTGGTT TAGCTTGTCT TTGTTTGCTT
CGTGACTTGG CTTGGAAGTA CTACAAGCGA AGCTACACTC CCGAGAGCTA CCACTATGTT
CAAGAAATTC AGAAATACAA CATCCAGGAC TACAGACCTA GAATGGAACA GTTCCAGAAG
GCTATTAGAA AGGTCAGACA GGTACAAAGA ATCAAGAAGC AAAGAGGATT TGCCTTTTCA
CAAGTGGAAA ACCAAGATCA AGAGAAGATT GTCAGATTGT ACGATACCAC CAAGAAGAGA
GGTGTTTTTG GTGAGTTGTC AGAGAGCTAA
 
Protein sequence
MDHSANSHYG YFGNHISTTK YNFATFIPKF LFEQFSKYAN LFFLFTSIIQ QVPNVSPTNR 
YTTIGTLTVV LLVSAIKEIS EDIKRANADK ELNNTKVLVL DSQTGSFALK KWIQVQVGDI
VRVDNEQPFP ADLLLLSSSE PEGLCYIETA NLDGETNLKI KQALENTAYL VNPRDLVSDM
SKSEIMSEPP NSSLYTYEGN LKNFGSNGDI PLSPEQLLLR GATLRNTQWI HGVVVFTGHE
TKLMRNATAT PIKRTDVERI INLQIVALFC ILIFLALVSS IGNVVKIQVN SSSLSYLYLE
GVSRARLFFQ GLLTYWILFS NLVPISLFVT VEIIKYYQAF MIGSDLDMYF PDTDTPTGVR
TSSLVEELGQ IDYIFSDKTG TLTRNIMEFK SCTIGGRCYI DEIPEDGQAQ VIDGIEIGYH
TYDQMQRELL DTSSQHSAII NEFFTLLSTC HTVIPEVDDT TGHIKYQAAS PDEGALVQGA
ADLGYKFIIR RPKGVTIENT ITSVKSEYEL LNICEFNSTR KRMSAIFRCP DGIIRLFCKG
ADTVILERLS QDEPQPFVDA TLRHLEDFAA EGLRTLCIAS RIVSDEEYQN WASQYYEAST
SLDDRSGKLD AVAELIETGL FLLGATAIED KLQDGVPETI STLQTAGIKI WVLTGDRQET
AINIGMSCKL LSEDMNLLII NEETKSDTRL NLQEKLTAIQ DHQFEMDEGA LESSLALIID
GHSLAFALES DLEDLFIDLG SRCKAVICCR VSPLQKALVV KMVKRKKKQS LLLAIGDGAN
DVSMIQAAHV GVGISGMEGM QAARSADISI GQFKFLKKLL LVHGSWSYQR ISNAILYSFY
KNITLYMTQF WFVFTNGFSG QSLIESWTLT FYNVFFTVFP PFVLGVFDQF VSARLLDKYP
QLYQLGVQRK FFNVTIFWGW IINGFYHSAL IFLCSFFIYR FGNVLPTGLI ADNWTWGTAV
FTTCTLTSLG KAALVVTMWT KFTLIAIPGS FLFWLAFFPA YASIAPNINV SQEYRGVLRA
TYPTIVFWSM VFGLACLCLL RDLAWKYYKR SYTPESYHYV QEIQKYNIQD YRPRMEQFQK
AIRKVRQVQR IKKQRGFAFS QVENQDQEKI VRLYDTTKKR GVFGELSES