| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_33409 |
|---|
| Symbol | |
|---|
| ID | 4840491 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009047 |
|---|
| Strand | - |
|---|
| Start bp | 548339 |
|---|
| End bp | 548971 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640391806 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001386301 |
|---|
| Protein GI | 150866636 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.306188 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.51353 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGAAC TACAACCAAT CAATCAGCCA GAGGGACCTT TAGGGATTTT CTCTGGTGAG
AGCTCTTCGA ATCAAGCCTT AAACGAGCCA AAACCACCGG ATATTGACCG AAATCCACAC
GACCATGTCG CACCCCCTGA TCTGATGGAC CTCGATGGCG AGTCCTCAGA TGCCGTAGAA
ACCGGCGAAT TGGAGCCATC TTTCGTGACA GCAGGATCAG TTATTGCTGA TGACTCTTTT
GACGATACCC AAGAAGCCTC AAACGCTTTA AACACCTTGA ACGAAGGGCC AGAAATGTCG
ACTATGGACA GCTTTGAAAC CTCAGTTTCG AAAAATTCTT CACATCACGT GATCGAGGAA
GAACACGACC CAGTTTTGGC TGCAAAAGGA GATACTGTTA TGATATCTCA AAATCCTACT
TCCATTAGCG ATTGGCTAAA GTCTACATCC ACCAGTGACT CCGTTGAAAT TACAAATGTT
TATATTAAAG AAAAAAACCC TAAATCCCAA AAAAAATCCT TTCAGAAAAT GAAGAAATCA
AAAAAAAATA ACCTCAGGAG CTCCTCTTAC CGATCTGATC TGGAACGGTC AGAATTCCTC
GCTCCAACAT CACAAAAACA ATTCATCAAT TAA
|
|---|
| Protein sequence | MSELQPINQP EGPLGIFSGE SSSNQALNEP KPPDIDRNPH DHVAPPDSMD LDGESSDAVE
TGELEPSFVT AGSVIADDSF DDTQEASNAL NTLNEGPEMS TMDSFETSVS KNSSHHVIEE
EHDPVLAAKG DTVMISQNPT SISDWLKSTS TSDSVEITNV YIKEKNPKSQ KKSFQKMKKS
KKNNLRSSSY RSDSERSEFL APTSQKQFIN
|
|---|
| |