Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_33386 |
Symbol | |
ID | 4840726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009047 |
Strand | - |
Start bp | 477351 |
End bp | 477875 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 12 |
GC content | 37% |
IMG OID | 640392041 |
Product | predicted protein |
Protein accession | XP_001386293 |
Protein GI | 150866629 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.330096 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00339265 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATGTTTC ATGTACTCCT ATATCTTATT TTAAATTTCT GTTTGGTCAA CGCTGTTATG ACGACTTCTT ATTCTAAAGC AATAGGCTTG TTCACAAGTG GAACAGCGTC TTTTGCAAAG AATTCTGGGG TGATCAGAGT AGGTTCTAGA GATGCGCCTC GTGATGGTAT TAATCCGTAT TTCGTTCCTT TGAATTTCTA CCTGTTTGAC AACTATTCTA AGTTGAAAGC GATTTCTAGT ATACTAAATG CTGCTGTTGA AGCTGGAGCT ACCGGTGACA TATTGTATTT GTACAATTAC ATTGCTTTTA ATGGTGAAGA AGGGAATGTG GCCTTAACAA ATTATACTTC AAACTTCAAA GATGAAGTTT GCCTATTTTT GAAGACATAC GAAGCTAATT CAACATTAGA ATTATCAGAA ACTACAGCGG ACAAGAAGCT ATCTACGTAT TATAAGAATT TCCCAGTTGG AGATTGCGGA GGGGATGTCG GTGGAGATTT CAGTTCTCAT GGATATAAGA CTTAA
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Protein sequence | MMFHVLLYLI LNFCLVNAVM TTSYSKAIGL FTSGTASFAK NSGVIRVGSR DAPRDGINPY FVPLNFYSFD NYSKLKAISS ILNAAVEAGA TGDILYLYNY IAFNGEEGNV ALTNYTSNFK DEVCLFLKTY EANSTLELSE TTADKKLSTY YKNFPVGDCG GDVGGDFSSH GYKT
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