Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_33382 |
Symbol | |
ID | 4840724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009047 |
Strand | - |
Start bp | 469743 |
End bp | 470558 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 12 |
GC content | 40% |
IMG OID | 640392039 |
Product | predicted protein |
Protein accession | XP_001386291 |
Protein GI | 150866627 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.578635 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00106349 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATTTCTA TTTTGGTTTC AATTTTTCTT AGCTTTCTCG GCATTGTCAC TGCGGCAATC AACGATCCTG CTTACTACAA TTCATTATCT TCTTTTATTA ACAAGGAACA CAACTTTTCA AAGGGCAACG GAACTATTTC CGTAGAAGCT GCTTCGTTGG TTTACAATAA GAGAAGCGAG TACGATTCCT ACTTTAAAGA CTTCTCGTTT TATCTGTTTG ATGCTTTCGA CAAGTTGGTT CAATTGCATT CATTGCTTAA AGATGCAGAG TTAGCAAGTG CAACTGGTGA TAGATTGTAC TTGTATAATT ACATCGCATT CAACGGACAA GACGAGCAAG TCGAACTTAG TTCTTCTTCA GCTTTCAAGC AGGAGGTATG CAAATTTTTG GATATCAATA GCCTCAACGA TACTTCTACC TTATCAGCAA GTTCAGGAAA CGCAGATTTG TCATTGTTCT ACCAACAGAT CCAAATTGAA GACTGCGGTA AGTCGAAAAA TATCGCCAGA GATAGCACTA GTTGTGATGG AAGTCATGCT CCTAATGCTG GTAATTGTCA GGCCTTGGCC GACGACCTTG AGTATAATCA TGGTGGAGAT GTATTTAGTG ATTCTCCAAG ATCGTATTGC CTCGCAGGAT GTTGTGTATC ATGGAGTGCA CCTATATCTG CTACAGGAGA TTGGCTTTCT GCAAAAGCTG GTTGGTGTAT TCAACAATGT GTTAATGCAG GGTTGAGTTG TGAAATTTTT GGTGTTGTTT ACGCAAACAA AACACTTGAC TTTTGTTTAA GTTACAGAGC GGATGGGTGT ACCTAG
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Protein sequence | MISILVSIFL SFLGIVTAAI NDPAYYNSLS SFINKEHNFS KGNGTISVEA ASLVYNKRSE YDSYFKDFSF YSFDAFDKLV QLHSLLKDAE LASATGDRLY LYNYIAFNGQ DEQVELSSSS AFKQEVCKFL DINSLNDTST LSASSGNADL SLFYQQIQIE DCGKSKNIAR DSTSCDGSHA PNAGNCQALA DDLEYNHGGD VFSDSPRSYC LAGCCVSWSA PISATGDWLS AKAGWCIQQC VNAGLSCEIF GVVYANKTLD FCLSYRADGC T
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