Gene PICST_33382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_33382 
Symbol 
ID4840724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009047 
Strand
Start bp469743 
End bp470558 
Gene Length816 bp 
Protein Length271 aa 
Translation table12 
GC content40% 
IMG OID640392039 
Productpredicted protein 
Protein accessionXP_001386291 
Protein GI150866627 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.578635 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00106349 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTTCTA TTTTGGTTTC AATTTTTCTT AGCTTTCTCG GCATTGTCAC TGCGGCAATC 
AACGATCCTG CTTACTACAA TTCATTATCT TCTTTTATTA ACAAGGAACA CAACTTTTCA
AAGGGCAACG GAACTATTTC CGTAGAAGCT GCTTCGTTGG TTTACAATAA GAGAAGCGAG
TACGATTCCT ACTTTAAAGA CTTCTCGTTT TATCTGTTTG ATGCTTTCGA CAAGTTGGTT
CAATTGCATT CATTGCTTAA AGATGCAGAG TTAGCAAGTG CAACTGGTGA TAGATTGTAC
TTGTATAATT ACATCGCATT CAACGGACAA GACGAGCAAG TCGAACTTAG TTCTTCTTCA
GCTTTCAAGC AGGAGGTATG CAAATTTTTG GATATCAATA GCCTCAACGA TACTTCTACC
TTATCAGCAA GTTCAGGAAA CGCAGATTTG TCATTGTTCT ACCAACAGAT CCAAATTGAA
GACTGCGGTA AGTCGAAAAA TATCGCCAGA GATAGCACTA GTTGTGATGG AAGTCATGCT
CCTAATGCTG GTAATTGTCA GGCCTTGGCC GACGACCTTG AGTATAATCA TGGTGGAGAT
GTATTTAGTG ATTCTCCAAG ATCGTATTGC CTCGCAGGAT GTTGTGTATC ATGGAGTGCA
CCTATATCTG CTACAGGAGA TTGGCTTTCT GCAAAAGCTG GTTGGTGTAT TCAACAATGT
GTTAATGCAG GGTTGAGTTG TGAAATTTTT GGTGTTGTTT ACGCAAACAA AACACTTGAC
TTTTGTTTAA GTTACAGAGC GGATGGGTGT ACCTAG
 
Protein sequence
MISILVSIFL SFLGIVTAAI NDPAYYNSLS SFINKEHNFS KGNGTISVEA ASLVYNKRSE 
YDSYFKDFSF YSFDAFDKLV QLHSLLKDAE LASATGDRLY LYNYIAFNGQ DEQVELSSSS
AFKQEVCKFL DINSLNDTST LSASSGNADL SLFYQQIQIE DCGKSKNIAR DSTSCDGSHA
PNAGNCQALA DDLEYNHGGD VFSDSPRSYC LAGCCVSWSA PISATGDWLS AKAGWCIQQC
VNAGLSCEIF GVVYANKTLD FCLSYRADGC T