Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_33291 |
Symbol | |
ID | 4840462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009047 |
Strand | + |
Start bp | 228544 |
End bp | 229632 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 12 |
GC content | 39% |
IMG OID | 640391777 |
Product | predicted protein |
Protein accession | XP_001386061 |
Protein GI | 150866452 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACTCTC CTATACTTCG GTATGATTCC GAATCTACTT TAGAAAGTCC CTTCCATCCT CCGCGCAACC AATCAAAGAG ACACCACTAC AGTGAAGAAT CAGACAACGA TATGTCCCCC TTGAAAAGAA GACAGATTCT ACATGAACCT TCTGAGCTTG CGAACGAACG AAAATTCGAA ACGAAGTACA ACTTTAATGA TTGGATCACT AGACATCCAA TAGAAGCTTC AACACCCATG AGACCTACGA AGGGAAAGTT TCCAACGGAC TTGTACAAAG AAGAATCCAC TCCATTTTCT TATAGGGAAG AAGCTTCAAC TTCTGAAAAA AGTCTAGGTC TATCTCTATC CGGAAAACTC TACAGGGACT TCAAAACGCC TCCTACTACT GCCTTCGACA TTTTTGAAAG GACCCAAGTT ACAGAAGAGA GCATTATCTC GCCTGAACTT GAAGCAGTTA GAAGAAGCTT CTTTGCGGAT TGTTCACTCG GAATTGAAAA TGATCATATA ACCCAACAAT CGAAGGAAGA AAAAACTGGA CAATCAAATA CTGAAGGCTA TGTAATGGAT CTTATAGGGT CTTCGCTTCT TCCTCAAAAT CTAAGACCTT ATCGATACTA TATCAATAAA GATGTGTCAC CCATTTACAA GACAACACGA AGACTAGAAG CTGAAGATAA GAAAAATAGC TTAATCGATT CAGAAGCAGA GCTAGTGCCA ATAACCACTT CTTTCTTTTT AGAGAAAGAA CCTGGGACTT TTCCTATTCA ACCAATTTTC CCAAATTGGT TGGTCTCAAA ATTGGCAACT ACCGAAAAAT CAAACTTCAA AAACACAATT CCTTCCACTA AGACTGAAAG AGAGTACTTT CCAGAAGGTG AAGACAATCA GACTGTGCTC TCTTGTTCGG ATATCCCAAT TCTGAGTGGT ACTAAAAGAG CATGCAAGCG TTCAACTTCT CAAAGGTTTT TTGATTGGAT TGAAAAGTTG AAGAGAGAAC ACGAAGAAAG GAGACTCAAA CGTAAAGCCG TAGGCAAAGG TGTGATTCAA CTTACACGTC AACCACAGTA TTCTTATAAA GACAAATAG
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Protein sequence | MYSPILRYDS ESTLESPFHP PRNQSKRHHY SEESDNDMSP LKRRQILHEP SELANERKFE TKYNFNDWIT RHPIEASTPM RPTKGKFPTD LYKEESTPFS YREEASTSEK SLGLSLSGKL YRDFKTPPTT AFDIFERTQV TEESIISPEL EAVRRSFFAD CSLGIENDHI TQQSKEEKTG QSNTEGYVMD LIGSSLLPQN LRPYRYYINK DVSPIYKTTR RLEAEDKKNS LIDSEAELVP ITTSFFLEKE PGTFPIQPIF PNWLVSKLAT TEKSNFKNTI PSTKTEREYF PEGEDNQTVL SCSDIPISSG TKRACKRSTS QRFFDWIEKL KREHEERRLK RKAVGKGVIQ LTRQPQYSYK DK
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