Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_33243 |
Symbol | |
ID | 4840569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009047 |
Strand | + |
Start bp | 105337 |
End bp | 106446 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 12 |
GC content | 46% |
IMG OID | 640391884 |
Product | predicted protein |
Protein accession | XP_001386035 |
Protein GI | 150866434 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0434678 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.79491 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAGACA GCCAAAGTTT AACCGTCGGA CTAGCAGTGG GCATCCCCTC GTTCGTTATC ATCTCCGTGG TGCTCCTCTT GTGGTTACGT AATCAGCGCA AACAAAAGAA GGAAGACTCT GTCAACGACG ACATCGACAT GGACCTCAGA GACGACCAGT CCTTCAACCA GTTCCAAGAA GAACTACATC GGCCTTACGC AAAAGGGAAA GCCGAACTAA ACATAAACAC ATACAGCGAC CCCAATAAGT CGTCATCAAC AACGCAGGGT GAATCCTCTA CAGAAAAACC CTACATCTCC TCGCATGGAT CTACATCATC CAGCAACATA ATTGACCAGC CCCACGTCTA TGCGACTCCA CCACGTCCTA AATACAGTAA TGCTAACAAC GGCACTAATA ACGTAAACAA TAACAACATC AACAACTTAA ACAACAACTT AAACAACAAC ATCAATAATA CTAATAATAT TCATCTGAAA TCTCCTTCGG CGTACGATTT CTACGAGACC TTTATTCCTA TATTACCAGG AGGAGGTAGT CCCTCCACTA ACAACGGCAA CACAGCGCAC CATTCCAATG CGAACAGCGT CCACGAGGCT CACAGTAACG GTAATTTGCA AAGCCAACTC CAGCAGCCTC CTCATATTCA CGATGTTGCG TCTACAAACA ACAGCTCTAA CGATAGTTTG AACGGCAACG ATAGATCGTC TCTAGATAAT TTGGCTAAAC AGTTAACAAG CCCCGTCTTC TTTGAAAAGT TGCCCTCGCG TGCCACCACG GTAGCGTTGA AACCTCGTTT CCCCAACATG CAATCGAACA ACTCTTCTAG TGAAGGCTTG AACAATAGAT TGATCGGCGA CACTACTGCT CTCAATGACA ACTTCATCTA CGAAGCACCT ACAGTGGATG TGAAAAAGAC AGAGTTGCAG GCCAAAGATT TCCAGCGCAG TCATCTTTCA CGTGAACAAA CAGTGAAGTC TCATGAAGAC GATGTTTCGT CTATACTGGC CAGTCACGCT GAAGACGTCG ATTCTTTGGT GGAGCCTGAT GTGTCGAGGT CTTCGAATGA CGACGAATTC GTTTCGGATA TCGACACTAC CGCCAGTTGA
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Protein sequence | MVDSQSLTVG LAVGIPSFVI ISVVLLLWLR NQRKQKKEDS VNDDIDMDLR DDQSFNQFQE ELHRPYAKGK AELNINTYSD PNKSSSTTQG ESSTEKPYIS SHGSTSSSNI IDQPHVYATP PRPKYSNANN GTNNVNNNNI NNLNNNLNNN INNTNNIHSK SPSAYDFYET FIPILPGGGS PSTNNGNTAH HSNANSVHEA HSNGNLQSQL QQPPHIHDVA STNNSSNDSL NGNDRSSLDN LAKQLTSPVF FEKLPSRATT VALKPRFPNM QSNNSSSEGL NNRLIGDTTA LNDNFIYEAP TVDVKKTELQ AKDFQRSHLS REQTVKSHED DVSSISASHA EDVDSLVEPD VSRSSNDDEF VSDIDTTAS
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