Gene PICST_32871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_32871 
Symbol 
ID4840375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp827573 
End bp828631 
Gene Length1059 bp 
Protein Length352 aa 
Translation table12 
GC content40% 
IMG OID640391690 
Productpredicted protein 
Protein accessionXP_001385522 
Protein GI150866053 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.566775 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0222325 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAATGT CAGAAGCCGG AGAGCTCAGC AGAGAGGAGC TAATAGAACG AGTGGTCGAG 
CTCGAGACTG TATTGTCTGA ATTCCAGGAA TCCAGTAAGG AATTAGAACA ATTATTGGAA
GAAGAACTTC AGGATCTCGA GAGAGCCAAT ACTACACTAC AGTCAACTTT GGATAAAACA
AATGAGCAAT TGCTAAAGTC AAATTCAAGG ATTGTTGAAT TGACAAGAGA ACTCAACGAG
TCACAAGAAA AAGCAGCAGA AAAGGCCCGA GAACAAGAGC ACAGACTATC CGAAATACAG
CAACAGTTGG TAACAGTAGA AATATCCAAC GATAGTATGG AGTCCAACGA TAGGATACTT
ACAAACAAGC TTGATCTCGC CAATCAACTC AATAATGTAT TGTTGGAGAA GTTGGCTCTT
ATAGAAAATG ATTTGGAAAG AGAGAAGAAA GCAGGGATCG AAAAACGGTT GTACATTAGC
AATTATCAGA ATCAGGTCAA GGATCTACAG AAAACAATAG AAATACTTGA AAAGAAAACA
ACGGCTGATG TCCCCGAAGC GGACACACTG TTAATAAGCA TAGGAGCTGT GTTGAAAGAG
GGACCTCCTG ATGAAAATAG TCTGGCACCA ATCAGTACTA TAAAAAAATC CAACAGTTTA
CAAGGAATCA AGAGCCTTAA TGAAGGAGTA CAGGCATATA TACTTTCTAC ATCAACAAAG
TCGCTCAAAT CATCATCTTC TGTACAGTTA ACGGTTCCAC TGATGGTGGA CTATCTGTTC
AGAAGATCTG TTTCTGCGGG AAATGAAAGA AGTTCTTCTA TTCCGTCTAC TCAATCGTTC
AACAGACTCA GTCTTTTCAT GGATCCACGA GATACACGCC CACAACCTTT AGGGTTATCT
GAGAAAGAAA ATAGGAGTCG CGTTTTACAA GGCGATGCTA AGACCAGAAC GAGAAATTAT
AGTCATCCAT TGAGAGTCAT ACCCGGTTCT CCCAACACAG CGAAGATTTC GAATCTAGAG
TCGAAACCCC AGTCAAAGAA GAAACTTGTG TATAACTAA
 
Protein sequence
MSMSEAGELS REELIERVVE LETVLSEFQE SSKELEQLLE EELQDLERAN TTLQSTLDKT 
NEQLLKSNSR IVELTRELNE SQEKAAEKAR EQEHRLSEIQ QQLVTVEISN DSMESNDRIL
TNKLDLANQL NNVLLEKLAL IENDLEREKK AGIEKRLYIS NYQNQVKDLQ KTIEILEKKT
TADVPEADTS LISIGAVLKE GPPDENSSAP ISTIKKSNSL QGIKSLNEGV QAYILSTSTK
SLKSSSSVQL TVPSMVDYSF RRSVSAGNER SSSIPSTQSF NRLSLFMDPR DTRPQPLGLS
EKENRSRVLQ GDAKTRTRNY SHPLRVIPGS PNTAKISNLE SKPQSKKKLV YN