Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_32871 |
Symbol | |
ID | 4840375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009046 |
Strand | + |
Start bp | 827573 |
End bp | 828631 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 12 |
GC content | 40% |
IMG OID | 640391690 |
Product | predicted protein |
Protein accession | XP_001385522 |
Protein GI | 150866053 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.566775 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0222325 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAATGT CAGAAGCCGG AGAGCTCAGC AGAGAGGAGC TAATAGAACG AGTGGTCGAG CTCGAGACTG TATTGTCTGA ATTCCAGGAA TCCAGTAAGG AATTAGAACA ATTATTGGAA GAAGAACTTC AGGATCTCGA GAGAGCCAAT ACTACACTAC AGTCAACTTT GGATAAAACA AATGAGCAAT TGCTAAAGTC AAATTCAAGG ATTGTTGAAT TGACAAGAGA ACTCAACGAG TCACAAGAAA AAGCAGCAGA AAAGGCCCGA GAACAAGAGC ACAGACTATC CGAAATACAG CAACAGTTGG TAACAGTAGA AATATCCAAC GATAGTATGG AGTCCAACGA TAGGATACTT ACAAACAAGC TTGATCTCGC CAATCAACTC AATAATGTAT TGTTGGAGAA GTTGGCTCTT ATAGAAAATG ATTTGGAAAG AGAGAAGAAA GCAGGGATCG AAAAACGGTT GTACATTAGC AATTATCAGA ATCAGGTCAA GGATCTACAG AAAACAATAG AAATACTTGA AAAGAAAACA ACGGCTGATG TCCCCGAAGC GGACACACTG TTAATAAGCA TAGGAGCTGT GTTGAAAGAG GGACCTCCTG ATGAAAATAG TCTGGCACCA ATCAGTACTA TAAAAAAATC CAACAGTTTA CAAGGAATCA AGAGCCTTAA TGAAGGAGTA CAGGCATATA TACTTTCTAC ATCAACAAAG TCGCTCAAAT CATCATCTTC TGTACAGTTA ACGGTTCCAC TGATGGTGGA CTATCTGTTC AGAAGATCTG TTTCTGCGGG AAATGAAAGA AGTTCTTCTA TTCCGTCTAC TCAATCGTTC AACAGACTCA GTCTTTTCAT GGATCCACGA GATACACGCC CACAACCTTT AGGGTTATCT GAGAAAGAAA ATAGGAGTCG CGTTTTACAA GGCGATGCTA AGACCAGAAC GAGAAATTAT AGTCATCCAT TGAGAGTCAT ACCCGGTTCT CCCAACACAG CGAAGATTTC GAATCTAGAG TCGAAACCCC AGTCAAAGAA GAAACTTGTG TATAACTAA
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Protein sequence | MSMSEAGELS REELIERVVE LETVLSEFQE SSKELEQLLE EELQDLERAN TTLQSTLDKT NEQLLKSNSR IVELTRELNE SQEKAAEKAR EQEHRLSEIQ QQLVTVEISN DSMESNDRIL TNKLDLANQL NNVLLEKLAL IENDLEREKK AGIEKRLYIS NYQNQVKDLQ KTIEILEKKT TADVPEADTS LISIGAVLKE GPPDENSSAP ISTIKKSNSL QGIKSLNEGV QAYILSTSTK SLKSSSSVQL TVPSMVDYSF RRSVSAGNER SSSIPSTQSF NRLSLFMDPR DTRPQPLGLS EKENRSRVLQ GDAKTRTRNY SHPLRVIPGS PNTAKISNLE SKPQSKKKLV YN
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