Gene PICST_32623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_32623 
Symbol 
ID4840331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp254003 
End bp254419 
Gene Length417 bp 
Protein Length138 aa 
Translation table12 
GC content49% 
IMG OID640391646 
Productpredicted protein 
Protein accessionXP_001385387 
Protein GI150865959 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00673859 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0439327 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTCAC AAAGCGGAAC CAACACCCCC ATTCCTTCCA ACGTCAACGT AGTTCAGTAC 
CACGAACAAC TAGGCGAAAC TGTCACCTGG GTCAAGGACT GGTACTCCCC AAACTTGACC
AGCAACTCTA GCGAAGACGG AATTTCTGAC TCCGTCAGGT TGAAGGGCTG GTTTAGAACC
AATATGAACC ACAAGAATTC GTCCAGCTTG AGCTACAGCC ACCAAGATGT CTTGGACTTG
AACCAGTGGA GATACCACAA GACCTCTATC CATGCTGTCG AGTCCACAAA CTCCGTTTCG
GACTCGACTG GACTGGTGGA CACGAATGAA GAGAGCCAGG CCAAGGTTTC CAGTAAAGAG
TTGGAGTCTG CCATAAAGTT CTCTGCTGAA GAAGGTCTGA TTTCTGGCTT AGGTTGA
 
Protein sequence
MFSQSGTNTP IPSNVNVVQY HEQLGETVTW VKDWYSPNLT SNSSEDGISD SVRLKGWFRT 
NMNHKNSSSL SYSHQDVLDL NQWRYHKTSI HAVESTNSVS DSTGSVDTNE ESQAKVSSKE
LESAIKFSAE EGSISGLG