Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_32596 |
Symbol | |
ID | 4840134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009046 |
Strand | + |
Start bp | 194855 |
End bp | 195985 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 12 |
GC content | 44% |
IMG OID | 640391449 |
Product | predicted protein |
Protein accession | XP_001385370 |
Protein GI | 150865948 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.26747 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTTTTC TATCTATACT ATGCTCGCTT CTAACTACAG TCGTACCGTT TGTGTTAACC ATTAAATGCT TTGATCCGGT GATTGCCAGC CAGATTCCAT ACACATCCTA CCAGTTTCTA CTCAACTATT GGATCTATTT TGTTATACTT CAGTTCGTCA ACATCAACTT TGTAACCACC CATGGGCAAT TCTACTTTGA CATCATTTCA CAGACGCTCA AGCTCTGGTT TTTGTACGGT AGTCTGAACA ATTTGGCTCT ATTCAACCGG TTTATTGTCA CCAGAGTCAC TTCTTCCAGA GACTTCAATG GCCTCTACCA TCTTGAAGCC AACTACATTA ACCCATTGTT GAGTAAATAC GTAACTTCCC AGATCCGTAC TGATTCTAGA GGCAAGAGAA TGGGGCAACT ACAATACTAT CTTATCAGAT TGGGCCAGAA ATATGCCAAT GACACCAATG TCGACGATAT GCTGTTTATT CTTTTAGAAC GTATACTATC TCTGGCCCGA ATGCTAGTGG TTTCGCTATT TGCTCCCCAG ATTCTGCCAA ATATCAAGAC TTCTCCTAGA AGAAATGAAA TGGTCCAGCA CTATCAACGT CATAGGTCAT CGAGTGGAGG GTCCAAGAGC CTTGGTACCA GCACCAGAAC AGCGCCACTG GTGTACAATG TCGGGTCATC TCCACGTAGC ATTTCTGGCG GAGGTCTGTA CCATGAAGCT ACAGTACTAG AGCTCAATAG GCATGGTGAT GCTATTGGAC AAAACTATAC AAATGCTCAA TCTATGCCGT ACCCAGTGGG GACGGGATCC AATTCGATTC TCAATGATAA TCTTGCAAAT GTTCCATTGA GCAAGTTCAT GAACAAACCT CGTAGTGTAT CTGAACGAAT CGATGCAGCG GCTTCCAAGT ATTTTGGCAT CAAGCCTAGG TCCAGTTCTG CGGGAGAATC GGATACAGTA CAAAGAGGTT TTGGTCCACT GGCTGGTTTT AGAGTGAATC CCAATTCAAT CAATTCCATC AGGCTGCTGT ACCAAATGGA ACAGCAGAGA GAGAACGACA TACCCCCATT AGTTACGGTG TCCTCACCTT CTTCGGGTAG AACAACTCCT GCAAGACAGC TACTAAACTA A
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Protein sequence | MIFLSILCSL LTTVVPFVLT IKCFDPVIAS QIPYTSYQFL LNYWIYFVIL QFVNINFVTT HGQFYFDIIS QTLKLWFLYG SSNNLALFNR FIVTRVTSSR DFNGLYHLEA NYINPLLSKY VTSQIRTDSR GKRMGQLQYY LIRLGQKYAN DTNVDDMSFI LLERILSSAR MLVVSLFAPQ ISPNIKTSPR RNEMVQHYQR HRSSSGGSKS LGTSTRTAPS VYNVGSSPRS ISGGGSYHEA TVLELNRHGD AIGQNYTNAQ SMPYPVGTGS NSILNDNLAN VPLSKFMNKP RSVSERIDAA ASKYFGIKPR SSSAGESDTV QRGFGPSAGF RVNPNSINSI RSSYQMEQQR ENDIPPLVTV SSPSSGRTTP ARQLLN
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