Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_32224 |
Symbol | |
ID | 4839322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | + |
Start bp | 978911 |
End bp | 979822 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640390637 |
Product | predicted protein |
Protein accession | XP_001384858 |
Protein GI | 150865583 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.706321 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.413427 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTGACG TGTTATTGGC CAAGAACAGG CTTCTTGTGA TTTCGTCTTC GGGCGCTTTT GCCAACTTCA ACCCATTGCA ATTGCAAGGT GTCTACGATG AATTAGATAC TTTCCTCACT GGTCACGGCG ACAGCTTGGA CTCCATTGAA TTGTTTACTT TGTACGAATT GCAGTTCTAC TTGCTGGTTA TGACTAATCA CGACATCAAA GCCAAATCTA TCCTCGATCG CTTGTTGGAT CAGTTTGGTT CTAACAAAAA GTCCCAGAGA ATCAAACTCC TACAGAGTAT ATATCTAGAG GCAGTTGGCG AAAAGGCAGC TGCCACAAAG CTCTTGGAGC AGAATATGGA CGAGACATTG TTACTGCGTC GTTTGGTGAC TTTTACTAGG AATAATGAAA ACGAAGCTGA CAACGAAGAG TATATTTCTA CATTGAACTT CTACCTAAAT CTACTGCCCT CGGATTTGGT TGCATGGGCA GAGTTGGCCC ACGAGTACAC GAGATCAGGC CACTACGACA AAGCTGTTTT CTGCTATAAG GAAATCTTGC TCCAAGAACC ACACGCTTAT CCCATCTTCT ATCAGGTAGG TTTGAACTAC TATTACCAAT TCTTGCAAGA AGAACGTAAC TTGAAAACTG ACAAAAAGGA TAAAATTGTA GAAATGACCC AACTTTTGTC GTATTCCAGA GATAACTTCT TGCGGAGTAT CGAGATATGC GATGTTTACT CCTTGTCGTG GGTTGGATTG TATGCTCTTA CGGGATTGAA GTTCAATGAC AAGTTGGCAA AGGTCAAAGA AGTCTCTGGT TATTTGGCTA AAAATGACAA ATTGAGAGAA CTCAGTGAAA AGAAAATCAA GCAGTTGTTG CCAGAGCAAG ACTTGGCCGA AGTTTTGTTG CAATTGAAGT AA
|
Protein sequence | MSDVLLAKNR LLVISSSGAF ANFNPLQLQG VYDELDTFLT GHGDSLDSIE LFTLYELQFY LSVMTNHDIK AKSILDRLLD QFGSNKKSQR IKLLQSIYLE AVGEKAAATK LLEQNMDETL LSRRLVTFTR NNENEADNEE YISTLNFYLN LSPSDLVAWA ELAHEYTRSG HYDKAVFCYK EILLQEPHAY PIFYQVGLNY YYQFLQEERN LKTDKKDKIV EMTQLLSYSR DNFLRSIEIC DVYSLSWVGL YALTGLKFND KLAKVKEVSG YLAKNDKLRE LSEKKIKQLL PEQDLAEVLL QLK
|
| |