Gene PICST_32224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_32224 
Symbol 
ID4839322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp978911 
End bp979822 
Gene Length912 bp 
Protein Length303 aa 
Translation table12 
GC content42% 
IMG OID640390637 
Productpredicted protein 
Protein accessionXP_001384858 
Protein GI150865583 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.706321 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.413427 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGACG TGTTATTGGC CAAGAACAGG CTTCTTGTGA TTTCGTCTTC GGGCGCTTTT 
GCCAACTTCA ACCCATTGCA ATTGCAAGGT GTCTACGATG AATTAGATAC TTTCCTCACT
GGTCACGGCG ACAGCTTGGA CTCCATTGAA TTGTTTACTT TGTACGAATT GCAGTTCTAC
TTGCTGGTTA TGACTAATCA CGACATCAAA GCCAAATCTA TCCTCGATCG CTTGTTGGAT
CAGTTTGGTT CTAACAAAAA GTCCCAGAGA ATCAAACTCC TACAGAGTAT ATATCTAGAG
GCAGTTGGCG AAAAGGCAGC TGCCACAAAG CTCTTGGAGC AGAATATGGA CGAGACATTG
TTACTGCGTC GTTTGGTGAC TTTTACTAGG AATAATGAAA ACGAAGCTGA CAACGAAGAG
TATATTTCTA CATTGAACTT CTACCTAAAT CTACTGCCCT CGGATTTGGT TGCATGGGCA
GAGTTGGCCC ACGAGTACAC GAGATCAGGC CACTACGACA AAGCTGTTTT CTGCTATAAG
GAAATCTTGC TCCAAGAACC ACACGCTTAT CCCATCTTCT ATCAGGTAGG TTTGAACTAC
TATTACCAAT TCTTGCAAGA AGAACGTAAC TTGAAAACTG ACAAAAAGGA TAAAATTGTA
GAAATGACCC AACTTTTGTC GTATTCCAGA GATAACTTCT TGCGGAGTAT CGAGATATGC
GATGTTTACT CCTTGTCGTG GGTTGGATTG TATGCTCTTA CGGGATTGAA GTTCAATGAC
AAGTTGGCAA AGGTCAAAGA AGTCTCTGGT TATTTGGCTA AAAATGACAA ATTGAGAGAA
CTCAGTGAAA AGAAAATCAA GCAGTTGTTG CCAGAGCAAG ACTTGGCCGA AGTTTTGTTG
CAATTGAAGT AA
 
Protein sequence
MSDVLLAKNR LLVISSSGAF ANFNPLQLQG VYDELDTFLT GHGDSLDSIE LFTLYELQFY 
LSVMTNHDIK AKSILDRLLD QFGSNKKSQR IKLLQSIYLE AVGEKAAATK LLEQNMDETL
LSRRLVTFTR NNENEADNEE YISTLNFYLN LSPSDLVAWA ELAHEYTRSG HYDKAVFCYK
EILLQEPHAY PIFYQVGLNY YYQFLQEERN LKTDKKDKIV EMTQLLSYSR DNFLRSIEIC
DVYSLSWVGL YALTGLKFND KLAKVKEVSG YLAKNDKLRE LSEKKIKQLL PEQDLAEVLL
QLK