Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_32134 |
Symbol | |
ID | 4839419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | + |
Start bp | 771184 |
End bp | 772911 |
Gene Length | 1728 bp |
Protein Length | 575 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640390734 |
Product | predicted protein |
Protein accession | XP_001384811 |
Protein GI | 150865547 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0739683 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.893568 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGCTT TTATGCCAAT GGATCTGCTT GCCAGGGCCA GGGACGAAAT AGCCAGCGAT GAACCTATAC ATGTTAGTAA AGAAGGTAAA GAAAAACCAG AAAGTTCGTC TTCCAACGCT GAAAATATCA ATGACTCAGA CTACGCCAAA TATGTTTATG ATGAGCTTGA CGAAGATGCA ACTTTCCAGT CTTTGTTCGA CATGCTCGTG GAAATGTTCC CTATGATACC ACGAAATGAG GTAAAGATGA TAATGAGACT TTCTAATAGT TTCGCAGAAC TTATCGATAT CTTGCTACCT GAAGCGGACC TCTACACTTT CCTAAATCAC ATTGAAGAAG ATGTTGCAAA CAAAGCAGAA GCAGTAAAGG AAAATGCAAA GAGAAAGCGA ACTAAAAAGA TAGGAAATCA AAAGAAAGCT CTCCACGAAA CGAAGGAAGA AGTTGAAAGA GAAAAAATAG CATTGAGAGA AAGAATCAAA AAGGAACAGG CAGAATTGAG AGAACAGATC GAGAAGGAAC AGGCAGAAAA GAAAAAACAA ATTGAAAGGG AACAGGCAGA ATTAAGAGAA CAACTTGCAA GAGAACAGGC CACCTTGAAA GATGTCAAGC AGTACCATAG AGACGTCTAC GAATTGAAGC ACATATTCCC AGATCACGAC TTTGAAGTTT TGAACCAACA GTTGCAACTT AGCAATGGTG ATATTGAAGT GGCTATCCAC AAGCTTCTTG AAGGAGTGCC TGAAAAATAT GTTCCACCTC CAACAGCTGA AATCCCAAAT GCAACTATTA AAAAGAATGG TGACAGAATA CAGGCACTTA TCGATATACC CCTAGGCGAA ATTTTCAATT GCTTACGTGC AAACAATGGC CAGATTGGCC AGACATTGGT TGCATTAATC AAGAAGGGAG TTCAAAGTAG AAAACGAAGT AATTCGCATG ATATTCAGGG CGGTAGGGTA CAAAGGGGCA AAACTAGGAA TGTTTCTGCT GTTAGTGTCA AAATTATTAA TAAGAAATCT CCAAATCCAA CTATAGAAAA GAAGGTATTA GAGTATCTGA ACTCGCCCGA AGCCAAAGAA TTATACTTGT TGTATCACAG TAATCCTTCT TTCCACGGTA TTAGTGAGCA GTTCTTGTAT ATGATTTTGA ATACTGTTAA TGGAGATGTA TTCAAGTCCA TCGAGATATG CCGTTTGATC ATCGAATATC ATTGTGAGCA CCTTACTATC GGAACTGGGA AGGTAGAAAG GAGGGCAGAA GAACCCGAAG AGATGACTTA TGTTGATGCC ATTAAAAACA AAAAACCCAA ACAACAAACC TACGGTGATG ACGCCATGGA TATGATGAGT ATCAAATTTG AGAGCTTCAA GTCGAGAAGA GAAGAGATCA CCCATTCTCA CAAGACGGAG TATAACGCGA GAAAGGGAGG TTTCCTAGAA ACTATAGATT TGCATAACCT CAGATTGGCT ACTGCTATGG AACACACAAA GCGAGCCTTG CGTGCTTGGT GGGATCACGA AATGGAATTA AGGACTGTCG ACGGCAGAAT GGACAAATTT GGAAGCCGTG CTGCATGTGT AGCACCATTT GTTGTGATCA CGGGAAGAGG CATTCATTCA GCTGGAGGAG TTGCTGTGAT TAGAAGAGGC GTCAAGAACT TTTTGGATTC AGCCGGTTAT CTCTATGATG AGCATACCGG TAGGTTTGAA GTAACCGGCA AAATCTGA
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Protein sequence | MAAFMPMDSL ARARDEIASD EPIHVSKEGK EKPESSSSNA ENINDSDYAK YVYDELDEDA TFQSLFDMLV EMFPMIPRNE VKMIMRLSNS FAELIDILLP EADLYTFLNH IEEDVANKAE AVKENAKRKR TKKIGNQKKA LHETKEEVER EKIALRERIK KEQAELREQI EKEQAEKKKQ IEREQAELRE QLAREQATLK DVKQYHRDVY ELKHIFPDHD FEVLNQQLQL SNGDIEVAIH KLLEGVPEKY VPPPTAEIPN ATIKKNGDRI QALIDIPLGE IFNCLRANNG QIGQTLVALI KKGVQSRKRS NSHDIQGGRV QRGKTRNVSA VSVKIINKKS PNPTIEKKVL EYSNSPEAKE LYLLYHSNPS FHGISEQFLY MILNTVNGDV FKSIEICRLI IEYHCEHLTI GTGKVERRAE EPEEMTYVDA IKNKKPKQQT YGDDAMDMMS IKFESFKSRR EEITHSHKTE YNARKGGFLE TIDLHNLRLA TAMEHTKRAL RAWWDHEMEL RTVDGRMDKF GSRAACVAPF VVITGRGIHS AGGVAVIRRG VKNFLDSAGY LYDEHTGRFE VTGKI
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