Gene PICST_32134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_32134 
Symbol 
ID4839419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp771184 
End bp772911 
Gene Length1728 bp 
Protein Length575 aa 
Translation table12 
GC content41% 
IMG OID640390734 
Productpredicted protein 
Protein accessionXP_001384811 
Protein GI150865547 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0739683 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.893568 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCTT TTATGCCAAT GGATCTGCTT GCCAGGGCCA GGGACGAAAT AGCCAGCGAT 
GAACCTATAC ATGTTAGTAA AGAAGGTAAA GAAAAACCAG AAAGTTCGTC TTCCAACGCT
GAAAATATCA ATGACTCAGA CTACGCCAAA TATGTTTATG ATGAGCTTGA CGAAGATGCA
ACTTTCCAGT CTTTGTTCGA CATGCTCGTG GAAATGTTCC CTATGATACC ACGAAATGAG
GTAAAGATGA TAATGAGACT TTCTAATAGT TTCGCAGAAC TTATCGATAT CTTGCTACCT
GAAGCGGACC TCTACACTTT CCTAAATCAC ATTGAAGAAG ATGTTGCAAA CAAAGCAGAA
GCAGTAAAGG AAAATGCAAA GAGAAAGCGA ACTAAAAAGA TAGGAAATCA AAAGAAAGCT
CTCCACGAAA CGAAGGAAGA AGTTGAAAGA GAAAAAATAG CATTGAGAGA AAGAATCAAA
AAGGAACAGG CAGAATTGAG AGAACAGATC GAGAAGGAAC AGGCAGAAAA GAAAAAACAA
ATTGAAAGGG AACAGGCAGA ATTAAGAGAA CAACTTGCAA GAGAACAGGC CACCTTGAAA
GATGTCAAGC AGTACCATAG AGACGTCTAC GAATTGAAGC ACATATTCCC AGATCACGAC
TTTGAAGTTT TGAACCAACA GTTGCAACTT AGCAATGGTG ATATTGAAGT GGCTATCCAC
AAGCTTCTTG AAGGAGTGCC TGAAAAATAT GTTCCACCTC CAACAGCTGA AATCCCAAAT
GCAACTATTA AAAAGAATGG TGACAGAATA CAGGCACTTA TCGATATACC CCTAGGCGAA
ATTTTCAATT GCTTACGTGC AAACAATGGC CAGATTGGCC AGACATTGGT TGCATTAATC
AAGAAGGGAG TTCAAAGTAG AAAACGAAGT AATTCGCATG ATATTCAGGG CGGTAGGGTA
CAAAGGGGCA AAACTAGGAA TGTTTCTGCT GTTAGTGTCA AAATTATTAA TAAGAAATCT
CCAAATCCAA CTATAGAAAA GAAGGTATTA GAGTATCTGA ACTCGCCCGA AGCCAAAGAA
TTATACTTGT TGTATCACAG TAATCCTTCT TTCCACGGTA TTAGTGAGCA GTTCTTGTAT
ATGATTTTGA ATACTGTTAA TGGAGATGTA TTCAAGTCCA TCGAGATATG CCGTTTGATC
ATCGAATATC ATTGTGAGCA CCTTACTATC GGAACTGGGA AGGTAGAAAG GAGGGCAGAA
GAACCCGAAG AGATGACTTA TGTTGATGCC ATTAAAAACA AAAAACCCAA ACAACAAACC
TACGGTGATG ACGCCATGGA TATGATGAGT ATCAAATTTG AGAGCTTCAA GTCGAGAAGA
GAAGAGATCA CCCATTCTCA CAAGACGGAG TATAACGCGA GAAAGGGAGG TTTCCTAGAA
ACTATAGATT TGCATAACCT CAGATTGGCT ACTGCTATGG AACACACAAA GCGAGCCTTG
CGTGCTTGGT GGGATCACGA AATGGAATTA AGGACTGTCG ACGGCAGAAT GGACAAATTT
GGAAGCCGTG CTGCATGTGT AGCACCATTT GTTGTGATCA CGGGAAGAGG CATTCATTCA
GCTGGAGGAG TTGCTGTGAT TAGAAGAGGC GTCAAGAACT TTTTGGATTC AGCCGGTTAT
CTCTATGATG AGCATACCGG TAGGTTTGAA GTAACCGGCA AAATCTGA
 
Protein sequence
MAAFMPMDSL ARARDEIASD EPIHVSKEGK EKPESSSSNA ENINDSDYAK YVYDELDEDA 
TFQSLFDMLV EMFPMIPRNE VKMIMRLSNS FAELIDILLP EADLYTFLNH IEEDVANKAE
AVKENAKRKR TKKIGNQKKA LHETKEEVER EKIALRERIK KEQAELREQI EKEQAEKKKQ
IEREQAELRE QLAREQATLK DVKQYHRDVY ELKHIFPDHD FEVLNQQLQL SNGDIEVAIH
KLLEGVPEKY VPPPTAEIPN ATIKKNGDRI QALIDIPLGE IFNCLRANNG QIGQTLVALI
KKGVQSRKRS NSHDIQGGRV QRGKTRNVSA VSVKIINKKS PNPTIEKKVL EYSNSPEAKE
LYLLYHSNPS FHGISEQFLY MILNTVNGDV FKSIEICRLI IEYHCEHLTI GTGKVERRAE
EPEEMTYVDA IKNKKPKQQT YGDDAMDMMS IKFESFKSRR EEITHSHKTE YNARKGGFLE
TIDLHNLRLA TAMEHTKRAL RAWWDHEMEL RTVDGRMDKF GSRAACVAPF VVITGRGIHS
AGGVAVIRRG VKNFLDSAGY LYDEHTGRFE VTGKI