Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_32027 |
Symbol | |
ID | 4839129 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | - |
Start bp | 508100 |
End bp | 508693 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 12 |
GC content | 37% |
IMG OID | 640390444 |
Product | predicted protein |
Protein accession | XP_001385112 |
Protein GI | 126137177 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0981795 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGAAT TCTGCGAATA CTCACTTGCC AATTCATTAT CACCTCAGTC ATTCATTAAA TACAGCAAAT GGCATGATAA TGCTTGCGAT GAGACTTTCG AGTACTATCG GGAAGTCTCA AACCAACCTA AAACACTTCG AATCATTCGT TTTGACTATG ACAACTACTA CATTAGCCAT ATTGATCTTT ATACTATTGT TGAAGCAAGT TTAATAGTCG ATAACCAAAT TGAAACCTAT CCCAGGAACG CCTCTGGCAG ACATGACTTT GCACTCTATG CAAAATCCAA ATTTGGACAA ATTTTAACTC CAAGATCTTT GAATGCGTTC GACTTATGGA TGGAACACAG AAGTGAAGAA TTTAGAAATT GCTATAACTG CTTTGAAGTT CAGCTTTCGT TCTATGGCGA GGCATTGAAG TTTGTTCATT TCAAGCATGT TTCACAGGAA CACATCTACT TAGATTGTGA ACATGATCAA GAAAGATGGT TCTATAATAC TCAAGAACAG TTTTATCTCC GAAGAAAGAA AAATGCAGAT AAGGAGAAAG AGTTTTTGCA CCGCTTGGTT CAGAGGTTCA TAAGTAGTTT ATAG
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Protein sequence | MSEFCEYSLA NSLSPQSFIK YSKWHDNACD ETFEYYREVS NQPKTLRIIR FDYDNYYISH IDLYTIVEAS LIVDNQIETY PRNASGRHDF ALYAKSKFGQ ILTPRSLNAF DLWMEHRSEE FRNCYNCFEV QLSFYGEALK FVHFKHVSQE HIYLDCEHDQ ERWFYNTQEQ FYLRRKKNAD KEKEFLHRLV QRFISSL
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