Gene PICST_32027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_32027 
Symbol 
ID4839129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp508100 
End bp508693 
Gene Length594 bp 
Protein Length197 aa 
Translation table12 
GC content37% 
IMG OID640390444 
Productpredicted protein 
Protein accessionXP_001385112 
Protein GI126137177 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0981795 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAAT TCTGCGAATA CTCACTTGCC AATTCATTAT CACCTCAGTC ATTCATTAAA 
TACAGCAAAT GGCATGATAA TGCTTGCGAT GAGACTTTCG AGTACTATCG GGAAGTCTCA
AACCAACCTA AAACACTTCG AATCATTCGT TTTGACTATG ACAACTACTA CATTAGCCAT
ATTGATCTTT ATACTATTGT TGAAGCAAGT TTAATAGTCG ATAACCAAAT TGAAACCTAT
CCCAGGAACG CCTCTGGCAG ACATGACTTT GCACTCTATG CAAAATCCAA ATTTGGACAA
ATTTTAACTC CAAGATCTTT GAATGCGTTC GACTTATGGA TGGAACACAG AAGTGAAGAA
TTTAGAAATT GCTATAACTG CTTTGAAGTT CAGCTTTCGT TCTATGGCGA GGCATTGAAG
TTTGTTCATT TCAAGCATGT TTCACAGGAA CACATCTACT TAGATTGTGA ACATGATCAA
GAAAGATGGT TCTATAATAC TCAAGAACAG TTTTATCTCC GAAGAAAGAA AAATGCAGAT
AAGGAGAAAG AGTTTTTGCA CCGCTTGGTT CAGAGGTTCA TAAGTAGTTT ATAG
 
Protein sequence
MSEFCEYSLA NSLSPQSFIK YSKWHDNACD ETFEYYREVS NQPKTLRIIR FDYDNYYISH 
IDLYTIVEAS LIVDNQIETY PRNASGRHDF ALYAKSKFGQ ILTPRSLNAF DLWMEHRSEE
FRNCYNCFEV QLSFYGEALK FVHFKHVSQE HIYLDCEHDQ ERWFYNTQEQ FYLRRKKNAD
KEKEFLHRLV QRFISSL