| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_32006 |
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| Symbol | SWD3 |
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| ID | 4839215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | - |
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| Start bp | 448715 |
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| End bp | 449818 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 12 |
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| GC content | 45% |
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| IMG OID | 640390530 |
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| Product | WD domain protein |
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| Protein accession | XP_001385098 |
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| Protein GI | 150865758 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGCTAG AAGGATTAGC CAACGGCTTC TCGGATGCAA CGGCGAAAAA CGGAGTCGAA
AAAGCAAAAT TCCCTGATTT GTACCGAGTG AAATATACCT TGAAAAACCA CCACAATTCT
TCAATAAACT CTATAAAGAT CCTGCCAGAC GGGTCAAAAT TCGCTACATG TTCATCTGAC
ACTACCATAC GTGTGTACGA TCTTGAGACA GGCATACTTA TCACAAAGTT GGACGGACAC
ACCAAGGGAA TATCCGACTT GGAGTTCTCC CCCATCAACT CGAACATACT TGCATCTTGT
TCGGATGACT TGACCATACG GCTCTGGCTG GTGAGCAAGA AGAAATGTGT CAAGATTCTC
CGCAAGCACA CCTACCACAT CACGACAATA AAATTCACCA CCAAGGGTAA TATGTTGATT
TCCGGTTCAG CGGATGAAAC TATCACTATA TGGGACATTA CTTCGGGAAG AGTTCTCAGG
ACACTAGCAG CACATGCTGA TCCAGTACTG TCACTCTGTC TCACTCCAGA CAACACTATA
ATCATCAGTG CCTCCTACGA TGGTCTTATG AGACTCTTCG ACTTAGAAAC GGGCCATTGT
CTTAAAACAC TATCGTTCAA CAGTACTTCT CATGGCACAG CTACAGCTTC CACCAACGAT
GTGCTCAATT TTCCCATTTC CAACGTAGAA ACATCTCCAA ATGGAAAGTA CATACTAAGC
TCTAGTCTAG ATGGTCTTAT AAGACTCTGG GACTACATGG ACAACAAGGT CATCAAGACG
TATACTGGTG TCGACGGTAA ACCAATCAGT GAGAAATTCA ATTGTGGAGC GCACTTTATA
ACCAAAACTT CTGATGCCAT GATCGTTTCG GGCACAGAAT CATGTGGAAT CCTCATTTGG
GATGTCCAAT CCAAACAGGT GGTGTTCCAG CTCCACCAAA GCGACGAGCC GGTGTTTGAA
GTTGACATCT ACAACGAAGG CAGACTCTTG GTGTCTTGCA GCCGAGACGG CATTATCAAC
GTGCTCGAAT TGAATGAAAA ATACATCAAA CAAAAGAGAG CAATCGGTAC AAGTCGCGAG
GAAACGCCAC TAACACCAGC ATAG
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| Protein sequence | MGLEGLANGF SDATAKNGVE KAKFPDLYRV KYTLKNHHNS SINSIKISPD GSKFATCSSD
TTIRVYDLET GILITKLDGH TKGISDLEFS PINSNILASC SDDLTIRLWS VSKKKCVKIL
RKHTYHITTI KFTTKGNMLI SGSADETITI WDITSGRVLR TLAAHADPVS SLCLTPDNTI
IISASYDGLM RLFDLETGHC LKTLSFNSTS HGTATASTND VLNFPISNVE TSPNGKYILS
SSLDGLIRLW DYMDNKVIKT YTGVDGKPIS EKFNCGAHFI TKTSDAMIVS GTESCGILIW
DVQSKQVVFQ LHQSDEPVFE VDIYNEGRLL VSCSRDGIIN VLELNEKYIK QKRAIGTSRE
ETPLTPA
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