| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_31961 |
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| Symbol | SCJ1 |
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| ID | 4839396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | - |
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| Start bp | 320035 |
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| End bp | 321159 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 12 |
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| GC content | 46% |
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| IMG OID | 640390711 |
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| Product | dnaJ homolog in endoplasmic reticulum |
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| Protein accession | XP_001385080 |
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| Protein GI | 150865743 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.108543 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGTTG TCACGATACT AGCAGTGCTT TTCGTAAACT TCGCACTTCT TATTGCGGCT
GCGCAAAAGG ACTATTATCA GATTCTTGGA GTGAACAAGG ATGCTGGCGA AAAAGAGATC
AAGCTGGCCT ATAGACAGTT GAGTTTGAAA TACCATCCAG ATAAGAATCC TGGCAGTGAA
GAAGCACACG AGAAGTTTTT GGAAGTGGGT GAAGCTTACG ACGTTTTGAG CAATTCCGAA
AAGAGATCAA ACTACGACAA ATTTGGTGAC GCCAACGGAG GACCGTCTAA CCAGGAGTTC
CAGTTTGATT TTGGAGATAT GTTTGGACAA TTCTTTGGAG GTCACGGTGG TGGTGGTCAA
GGCGGCCAGA GAGTACGTAA GGGTGACAGC ACACAAGTAA ACTTGCATGT AGCACTTGGC
GATTTCTATA ATGGAAAGTT GTTGGAGTTT GATGTTGAGA TGATGAACAT CTGTGAGAAA
TGTGAGGGTA CTGGATCAAA GGATAGACAA ACCCATACAT GTGACAAGTG CAAGGGTGCC
GGAGTAGTGA CAGTTCGTCA TCAGCTTGCT CCCGGTATGG TTCAACAGGT CAGAATGCAA
TGTGACCAGT GCGGAGGTAA GGGTAAGACT ATAGCCCATA AATGTGGCTC CTGCTCAGGA
AAGGGTGTCC ATGCTGGACC CAGACATTAT GAAGTATACA TCAAACCGGG CCAGCCGCGC
GATTCCAACA TTGTTTTGCA TGGCGAAGGT GACAGGAATC CAGACTGGGT TCCCGGCGAC
TTGATTATTA ATGTCCGCGA GGAGTTCGTC AAGAGCTGGG GCTACAGACG GATCCATAGT
AATTTGTACA GAACAGAAGT CTTGACTTTG AACGAATCCA TCGAAGGAGG CTGGGAGAGA
AAGATTGCAT TTTTGGATGC CGAAGATAAC GTTCTTACGT TGAAGAGAGA AAAAGGTGTC
AGGGTTACAG ACGGAGAAGT AGAGATCATC AAGGGCAAGG GGATGCCATT GTTGGATGAG
CACCAGGACC ATAATGATGA TTACGGAGAT TTATTCATCC AGTACAAGAT CCTTGTAGCT
GGGGGTAAGG CACAGAAGTT GCTGCACGAG AAAGATGAAT TATAG
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| Protein sequence | MRVVTILAVL FVNFALLIAA AQKDYYQILG VNKDAGEKEI KSAYRQLSLK YHPDKNPGSE
EAHEKFLEVG EAYDVLSNSE KRSNYDKFGD ANGGPSNQEF QFDFGDMFGQ FFGGHGGGGQ
GGQRVRKGDS TQVNLHVALG DFYNGKLLEF DVEMMNICEK CEGTGSKDRQ THTCDKCKGA
GVVTVRHQLA PGMVQQVRMQ CDQCGGKGKT IAHKCGSCSG KGVHAGPRHY EVYIKPGQPR
DSNIVLHGEG DRNPDWVPGD LIINVREEFV KSWGYRRIHS NLYRTEVLTL NESIEGGWER
KIAFLDAEDN VLTLKREKGV RVTDGEVEII KGKGMPLLDE HQDHNDDYGD LFIQYKILVA
GGKAQKLSHE KDEL
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