Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_31861 |
Symbol | |
ID | 4839570 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | + |
Start bp | 67625 |
End bp | 68953 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 12 |
GC content | 45% |
IMG OID | 640390885 |
Product | predicted protein |
Protein accession | XP_001384665 |
Protein GI | 150865444 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5167] Protein involved in vacuole import and degradation |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTTCC TCCGCAAGTT CATTGGCGCC ACTGCCACGG ACGAAGTTGC GCTGATTCCC TCGGGAAAGC TCTTTCTCAC GAGAGCACCG CTGCTGCCCA AGGGTGCGAT GGAATGTTTA TTTATCGATG CGTTTGCACT GATTAGACAG ACGACGCGTC CGTTCTACTA CCAGCTATGT ATCACACGGG TTTATCAAGA AGGAGAACTC GATGCCCATG GGCTGAGTGG GTTTGACGAT TCAGATGACG ACGACGATGA AGACAGAGAG AATGCCCATT CCATCACCGA TTCCACATCG GGATCTAAGG ACGAGTGGTC CTTCGCCATT GTAGAGGATT TGCAGATCCA TTGGTATAAT AAAGCAGATG GAACACGTGC CATAGCATGG AAAGACTTGA ACGGAGACTT TGGTGATAAG TTCGAGTTCA ATGTCGATGA AGACGTCAAA CTCAGCGATG TGGATGCATT TATGTTGGCA CTTTACAAGT GTTTGTACGA AGTAAAGTAC CACAAGAGTT CTCTTGGAAT TCGCCATTCC AGCGAACTAG ACGAATTTAT ATTTACGCCT AAACCAGATC TTCTTTCTAT GGAGAATCTT AAAGGTACAC GAATACTACA GTACGATTCT GAAGAAGAAG ATGACGACGA AGACGAAGAA GATCCTGAAG GTGTTGACCT GGACTCATCG AGCGATTTGC TTAAAGGTTC ATCATCGGTG GTGACGACTG TGGTTGATAC GGAGACGTTG TTGAGTCTCA AGACTCTAGA GCCAAAGGGA CACATAATAT ACCGAAGTTC TGCTTTCACA TTGCATCTAT ACGACTCTCA AGCAGGTTCA TTTAAACGAA AAGCAGAAGT AGGTGAAGTA AGTCTCAAGA TTATCGACTT GGACAACGAC TGGCGATATT CTCTTTATAT CACCAGTAAA GCAACTGATA CGCCTATCAG CTTCAGCGCA GCCATCACCA AGAAAATGAA ACCTACTTTC AACTACGAAC ATCTATCGTT CATCTTCAAC TATCTCACAT TTGACCAGAA AGAAGATTCG GCGTTTTCCT GGTTGCTCAA GTTCACCTCT ATCAAAGACT TGCTGGTATT CCAGAATGCC TTTATGGTAG CACTCTGGGA GTCTTCGAAC AAGAAAAAAT ACGCACGCTC CATCGAAACT GACCAGGTGG TGGATGCCTT TGCCAAACTC AATGTAGACG ACAACAAGTG TGATAACAAG CCTAAGACAG AAACCAGTGA TCTTGAGTAT ACCACTGCTC GTGAAGAGTA TGATGGACCC ATCGGTGGCA CAACAGCTCC CAGAAGCTCT CGAAGATGA
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Protein sequence | MNFLRKFIGA TATDEVASIP SGKLFLTRAP SSPKGAMECL FIDAFASIRQ TTRPFYYQLC ITRVYQEGEL DAHGSSGFDD SDDDDDEDRE NAHSITDSTS GSKDEWSFAI VEDLQIHWYN KADGTRAIAW KDLNGDFGDK FEFNVDEDVK LSDVDAFMLA LYKCLYEVKY HKSSLGIRHS SELDEFIFTP KPDLLSMENL KGTRILQYDS EEEDDDEDEE DPEGVDSDSS SDLLKGSSSV VTTVVDTETL LSLKTLEPKG HIIYRSSAFT LHLYDSQAGS FKRKAEVGEV SLKIIDLDND WRYSLYITSK ATDTPISFSA AITKKMKPTF NYEHLSFIFN YLTFDQKEDS AFSWLLKFTS IKDLSVFQNA FMVALWESSN KKKYARSIET DQVVDAFAKL NVDDNKCDNK PKTETSDLEY TTAREEYDGP IGGTTAPRSS RR
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