| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_31546 |
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| Symbol | |
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| ID | 4838508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | - |
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| Start bp | 1074761 |
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| End bp | 1076401 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 12 |
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| GC content | 39% |
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| IMG OID | 640389823 |
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| Product | predicted protein |
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| Protein accession | XP_001384509 |
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| Protein GI | 126135970 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning
[R] General function prediction only
[T] Signal transduction mechanisms
[Z] Cytoskeleton |
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| COG ID | [COG5126] Ca2+-binding protein (EF-Hand superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.133549 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCTT CCAACCCTAT CACGTCTGAG AGCTCTGGCC AACATCAGCC AGATAATGTG
ACATTATATA ATAGACCCGA TGATTACGAG GCCCTCTTCA ATAAGTTAGA TATACAACAT
AGTGGCGAAA TAACTATACG AGATTTCAAG AAGGCGTTGA GAGCATTAAA ACACCCTATG
AGTGACAATC CAGAGTTGAT TCAAACTATT TTTGATTCTT TTGATGCCAA TATGGATAAA
GTCATAGACT TTAATGACTT CAAGAAGTAC CTTACTGCGA CTGACGATCA GATTTTGAAA
GGCTTCAACA AAATAGATCA GGATAATGAC GGCAAGTTGA ATAAAGCTGA TTTTGTCCAC
TATTTAAAGC AATCATTACA TTTGTCACCA AGTGACTATA ATATTGATTT GTTGTTCAAA
CAAATCGATT ACAAAAACGA TGGTTACATC ACATATGATG AATTCAGACA GTTTTTGCTA
TTGATGCCTC GTTTGCATGG TTCCAGAATC AAGACTGCTT TTAATTTCAT CGCTGAAGAG
TTCGATTTGT CATCTGATGG TGATGTGACC CTAATTAATC AATTCTTGAA CGGTTTCGGA
TTTTTCTTAG CTGGTGGTTT GTCTGGTGTT GTGTCTAGAA CATGTACTGC ACCCTTCGAT
AGAATAAAAG TCTTCTTGAT TGCAAGGACC GACTTATCCT CTACTGTATT ACATTCCAAA
AAAGAAATTG CCCGTCAAAT AGCAGATGGT GCCTCGCAGA AAGTTATCGA AGAGGCCAGA
AGAAATCTCT TGTCAGCTGA AAGAGATTTG GCTAGACAAG TTCAAGACAA CCATCCCAAG
ACTATTAGAT CTCCAATTAT CCAAGCTGCT AGGACGTTAT GGAAACAAGG AGGTTTCAAG
GCATTTTACG TTGGAAATGG CTTGAATGTT GTTAAGGTCT TCCCCGAATC TGCTATGAAA
TTTGGTTCTT TTGAAGCAAC AAAGAGATTT TTGGCACGAA TTGAAGGAGT AGATGATACA
GCCAAATTAT CGAAAGTATC CACGTATTTG GCCGGTGGTA TTGGTGGTGT ATTCGCTCAG
TTCACTGTAT ATCCAATTGA CACTCTCAAA TTCAGACTAC AATGCTCTAA TTTGGACTCT
TCGCTCAAAG GAAATGCATT GTTAATCGAG ACCGCCAAAA ACATGTATAG GGAAGGCGGA
TTGAAGATGT TCTACAGGGG ACTTTTTGTA GGAGTAAGTG GTATCTTCCC TTATGCGGCT
TTGGATTTGG GAACATTTTC AACCATCAAG AACTATTTGA TTAAACGTGA AAGTAAGAGA
ACTGGAATAA GGGAGGAAGA TGTTCAACTA GCAAATGTTG TGGTCTTAAC ACTCGGTGCA
TTATCTGGAA CTTTTGGTGC TACAGTCGTA TATCCAGTCA ATTTACTTAG AACCAGATTA
CAAGCCCAAG GGACTTACGC TCACCCATAC AGATATGACG GATTTTCAGA CGTGTTGAAA
AAAACTATTG TTCGTGAAGG GTACCCAGGT TTGTTCAAAG GTTTAGTGCC AAATTTAGCA
AAGGTTGCTC CAGCCGTATC AATATCATAC TTTATGTATG AGAACTTGAA ACGACTCTTT
GGTCTAAACA ACGCTTTGTG A
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| Protein sequence | MSSSNPITSE SSGQHQPDNV TLYNRPDDYE ALFNKLDIQH SGEITIRDFK KALRALKHPM
SDNPELIQTI FDSFDANMDK VIDFNDFKKY LTATDDQILK GFNKIDQDND GKLNKADFVH
YLKQSLHLSP SDYNIDLLFK QIDYKNDGYI TYDEFRQFLL LMPRLHGSRI KTAFNFIAEE
FDLSSDGDVT LINQFLNGFG FFLAGGLSGV VSRTCTAPFD RIKVFLIART DLSSTVLHSK
KEIARQIADG ASQKVIEEAR RNLLSAERDL ARQVQDNHPK TIRSPIIQAA RTLWKQGGFK
AFYVGNGLNV VKVFPESAMK FGSFEATKRF LARIEGVDDT AKLSKVSTYL AGGIGGVFAQ
FTVYPIDTLK FRLQCSNLDS SLKGNALLIE TAKNMYREGG LKMFYRGLFV GVSGIFPYAA
LDLGTFSTIK NYLIKRESKR TGIREEDVQL ANVVVLTLGA LSGTFGATVV YPVNLLRTRL
QAQGTYAHPY RYDGFSDVLK KTIVREGYPG LFKGLVPNLA KVAPAVSISY FMYENLKRLF
GLNNAL
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