Gene PICST_31542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_31542 
Symbol 
ID4838375 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp1057833 
End bp1058905 
Gene Length1073 bp 
Protein Length205 aa 
Translation table12 
GC content41% 
IMG OID640389690 
Productpredicted protein 
Protein accessionXP_001384506 
Protein GI150865335 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.292971 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGTAA GTCAATTTTC AGTCTAGGAA TGCTGTTGTT ACTGTTGAAA TCCGGTATTA 
GATAAAGTTT GATAATGCAT GAATATGCAT GATCTAGAAA ATATCGTAGA TACCGGATAT
TGATAATCTA ATAGATTTGG CTGCAACTCT TGTGAGAGCC AATCATATAT CATAATAAGG
ATATGGTGGT AATAGAAAAC ACAATGGCAG GTACACAGAG AGGATAATAG AACCCCACAC
GGACATACGG AAATAGATGT GGAGAAAGGT TTCAATACCA CAGCTATGAA ACAAATGTGA
AACATGAGAA CAAGAATCCG TGGAGCATGT GAATGTGAGA CAACACCATA AATAAGGGTG
GTATCCTCTC AGAGTTAGAT AGACTTTCTT AATGTTTTAA TAACGATAAC TAGAACAACT
TACAAGTTCT ACCTTTACTG TTAACAATTA TTACACGTAA GACACTATGA ATGCTTCTGA
ATTTCAACAG GTTATGAGCC GTCACCTGAA GTTCAACTAC TCAATTTCGT TTCCTTCAGA
GCAATTGTTG GCTTCAAAGA AGAATTACAT TCTCATAAAG TAGTTAGCTC CAATCAAGTT
TCGTTTGATG AATCGATCTA CCCATTTGAA AACTCACCTG ATCATGCGCC AACTACGTCT
GCTTCGACTA TTCCTATGGG CGTGTCCGGT GTCCCTCGCA TTTCATCAGA CGTTGCCACC
ACTTCACGAG CTGAACACAT CTCAAGTGAT GAACATGAAA CTTCCTCGAG CGATCACTCA
CGCGCACAAT CACCTGATAT GCACAGGGAA GATTCTCCTG CGACCCCTGT ATCTATTTCG
CACAATTTGC AACCATTACA TTCGTCCCCT GCTGCGTCTC TTCTGTCCTA TGATTCCACG
GACTCTGAAC TTGCACGCAT GCCATCTAAT CTCCTCGCAT CCGATTCTAC GGGGGGTGAG
GTTCTCACCA AACACTCATT GACACCAGTG ATAAGTCCTG ACCAAAATCA GAGGACTGGA
AACAAGAGAA AGAAAGTGCC ATCAACGAAG ATGACAAAGA AAGTGAGATA TGA
 
Protein sequence
MPIPDIDNLI DLAATLNNLQ VLPLSLTIIT RYEPSPEVQL LNFVSFRAIV GFKEELHSHK 
VVSSNQVSFD ESIYPFENSP DHAPTTSAST IPMGVSGVPR ISSDVATTSR AEHISSDEHE
TSSSDHSRAQ SPDMHREDSP ATPVSISHNL QPLHSSPAAS LSSYDSTDSE LARMPSNLLA
SDSTGEDWKQ EKESAINEDD KESEI