Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_31363 |
Symbol | |
ID | 4838988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | + |
Start bp | 604746 |
End bp | 605654 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640390303 |
Product | predicted protein |
Protein accession | XP_001384079 |
Protein GI | 150865029 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.538947 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.012404 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACGATA ATCTTCTCGA AGAACTCGAA GGTCTCAAAA ATATCACCAA ACAACCAACA GCCTTCAAGA AGAAAATAAT TTCCAGCAAG AAGTCAAGTC AGAGGACAAA ACTCTCATTT GACGATGAAG AAGAGTCTGG AACTGAAGGT AGCATTCAGC TACCCGTGCT CAGTAGACTT GATCAACCAA AAGTCGTATC CAACCGAAAG AACTTCCAAA GTGTCCCTGT TTTCACAAGT AAGAGAGCAT TCAGTCTGAA ATCTGGAATT AGGTCGCAAT CTTCTTCTGA ACATGAAATG GAGCTTGAGC TAGATGACGA CCCAGAGAAC AATCCTGTGG TAGAGAACCC AGAGTTGTTG GATGCCAGTT TACGCGAGAA GCTAGTGGTA ACACCAGTTC CAGTAGTGGT GCAAACGAAG AAGTACGTTC CTATTGAAAC TAACCGATTT GAACCGCTTT CAGATAGACA ATTCAAGAAA CAGCTTAAAA CAGAATACGC GGACGAATAC AATTATGACG ACGGAACAGA GAAGGAACAA CCGAAAGAAA ACGAAGAGAC AGATATAGTC ATCAATACAG AAGATATGAT GGCGGAAGAC GAGCCTTTAG ATTTACGGCA GAACACAAAC TTTTCTATCA ACAGCGACAG GTACGACTTT GAGCTTGACG ATGATGAAGA TTCTGACGAA GAAGTTGATG ATAGTGTCTC GAAAAGGAAC AAGAATAAGA AGGTAGAACT TCGTGAGATA CTCACAGTAG AAGAACAGGT AACAGCTATG AAAAATTCGA TTCATCAACT CGAAATAGCT AAGCTTGAAC AGGAGACTAA AAAGAAACAA CTAGAAAATG ATTTGGAGAC GGTCCGTTCG AAGTTGGATG CTTTACGAAC TGAGCTAGCT TCTTTGTAA
|
Protein sequence | MDDNLLEELE GLKNITKQPT AFKKKIISSK KSSQRTKLSF DDEEESGTEG SIQLPVLSRL DQPKVVSNRK NFQSVPVFTS KRAFSSKSGI RSQSSSEHEM ELELDDDPEN NPVVENPELL DASLREKLVV TPVPVVVQTK KYVPIETNRF EPLSDRQFKK QLKTEYADEY NYDDGTEKEQ PKENEETDIV INTEDMMAED EPLDLRQNTN FSINSDRYDF ELDDDEDSDE EVDDSVSKRN KNKKVELREI LTVEEQVTAM KNSIHQLEIA KLEQETKKKQ LENDLETVRS KLDALRTELA SL
|
| |