Gene PICST_31363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_31363 
Symbol 
ID4838988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp604746 
End bp605654 
Gene Length909 bp 
Protein Length302 aa 
Translation table12 
GC content41% 
IMG OID640390303 
Productpredicted protein 
Protein accessionXP_001384079 
Protein GI150865029 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.538947 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.012404 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGATA ATCTTCTCGA AGAACTCGAA GGTCTCAAAA ATATCACCAA ACAACCAACA 
GCCTTCAAGA AGAAAATAAT TTCCAGCAAG AAGTCAAGTC AGAGGACAAA ACTCTCATTT
GACGATGAAG AAGAGTCTGG AACTGAAGGT AGCATTCAGC TACCCGTGCT CAGTAGACTT
GATCAACCAA AAGTCGTATC CAACCGAAAG AACTTCCAAA GTGTCCCTGT TTTCACAAGT
AAGAGAGCAT TCAGTCTGAA ATCTGGAATT AGGTCGCAAT CTTCTTCTGA ACATGAAATG
GAGCTTGAGC TAGATGACGA CCCAGAGAAC AATCCTGTGG TAGAGAACCC AGAGTTGTTG
GATGCCAGTT TACGCGAGAA GCTAGTGGTA ACACCAGTTC CAGTAGTGGT GCAAACGAAG
AAGTACGTTC CTATTGAAAC TAACCGATTT GAACCGCTTT CAGATAGACA ATTCAAGAAA
CAGCTTAAAA CAGAATACGC GGACGAATAC AATTATGACG ACGGAACAGA GAAGGAACAA
CCGAAAGAAA ACGAAGAGAC AGATATAGTC ATCAATACAG AAGATATGAT GGCGGAAGAC
GAGCCTTTAG ATTTACGGCA GAACACAAAC TTTTCTATCA ACAGCGACAG GTACGACTTT
GAGCTTGACG ATGATGAAGA TTCTGACGAA GAAGTTGATG ATAGTGTCTC GAAAAGGAAC
AAGAATAAGA AGGTAGAACT TCGTGAGATA CTCACAGTAG AAGAACAGGT AACAGCTATG
AAAAATTCGA TTCATCAACT CGAAATAGCT AAGCTTGAAC AGGAGACTAA AAAGAAACAA
CTAGAAAATG ATTTGGAGAC GGTCCGTTCG AAGTTGGATG CTTTACGAAC TGAGCTAGCT
TCTTTGTAA
 
Protein sequence
MDDNLLEELE GLKNITKQPT AFKKKIISSK KSSQRTKLSF DDEEESGTEG SIQLPVLSRL 
DQPKVVSNRK NFQSVPVFTS KRAFSSKSGI RSQSSSEHEM ELELDDDPEN NPVVENPELL
DASLREKLVV TPVPVVVQTK KYVPIETNRF EPLSDRQFKK QLKTEYADEY NYDDGTEKEQ
PKENEETDIV INTEDMMAED EPLDLRQNTN FSINSDRYDF ELDDDEDSDE EVDDSVSKRN
KNKKVELREI LTVEEQVTAM KNSIHQLEIA KLEQETKKKQ LENDLETVRS KLDALRTELA
SL