Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_31190 |
Symbol | |
ID | 4838632 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | + |
Start bp | 162004 |
End bp | 163109 |
Gene Length | 1106 bp |
Protein Length | 313 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640389947 |
Product | predicted protein |
Protein accession | XP_001383994 |
Protein GI | 150864964 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.14246 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAGTA TTGACGACAC AGTACGATAT GTCGCTACCT ATATAGATGT AATAGTGTTG ATCATCGGAA TTTTAATGTA AGTTCGAATC TCTTGGGTCT GGTTTCTTGT ATCAGTGCTC TATCGGATGT TTCAGTGCTA ACGAATTCTA GCATACCGAT GAATCTTGTG GTGTTGGTGG TCTTGTTGGT TTCTGGTCGG CTATTCTATT ACTATTGTGT GAGATACAAC CTTCCCAGTA GCTATAAGGA GTACCAGATC TCGTCGAAAG ATATTGCCTT GATTACTGGC GGATCTGGAG GTTTGGGCTC AGAGTTGATT AAACAGATGC TCTCCAAAGG TGTACAGAAG ATCTACAACT TGGATTTGAA GCTGTCTGTG GAGAGAGATT CTCGTATAGA TTACAGAAGA TGCGATGTTG GTAATGAATC TGAGCTCAAA CAGAGCTTGG ACAACATCTT GTCTGAGTTG AAAGAACAAA ATAGGAATAT CACTATTCTT ATTAATAATG CTGGCATCCG CCATAGCCAG TCGCTTTTGG ATCTTCCAGA TAAAGAAATC CACGACATCT TCAATGTCAA CACATTCTCT TTCATCTGGA CTCTCCGTAA AGTGACCTCG AATCATATAG ATACTGTCTT CAAGCAAGAC ACAAAAATAG ATAGAAAGCT CAGAATCGTC AATGTGTCTT CGATTCTTGG AGCTTTGGCA CCGCGAAATC TCTCGTTGTA TTCAGCTACA AAGTCTGCCA TAGTTCTGAT TCATGAATCC TTGACGCAGG AGCTTCTGGA GTATCCTGAA ATTCGGTTGT TGCTTGTAAC TCCTGGCCAG CTCTCTACGG GCATGTTTAA GGATGTCGAG CCTTCACGAA CGTTCTTAGC ACCCATCATC AGTGCCGAAT ATTTGGCAAG AAGGATTGTG GAAAAGATTA ATGTTGGAGA AAGCGGAGTC TACTGTGAAC CCTTGTACGC TAATTTCTTG CCCGGTATAA GGGTATTCCC AATGGTGCTA CAACACTTCT GTCGCTGGTT TTCAGAGATG GACACCAAGG TGAATTCAAA TTCAAAAAGA GGAAACGAAA GAGTCGATAT AGAAATAGAA AGATAG
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Protein sequence | MISIDDTVRY VATYIDVIVL IIGILIYKEY QISSKDIALI TGGSGGLGSE LIKQMLSKGV QKIYNLDLKS SVERDSRIDY RRCDVGNESE LKQSLDNILS ELKEQNRNIT ILINNAGIRH SQSLLDLPDK EIHDIFNVNT FSFIWTLRKV TSNHIDTVFK QDTKIDRKLR IVNVSSILGA LAPRNLSLYS ATKSAIVSIH ESLTQELSEY PEIRLLLVTP GQLSTGMFKD VEPSRTFLAP IISAEYLARR IVEKINVGES GVYCEPLYAN FLPGIRVFPM VLQHFCRWFS EMDTKVNSNS KRGNERVDIE IER
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