Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_30906 |
Symbol | |
ID | 4838122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | + |
Start bp | 1237336 |
End bp | 1238355 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640389437 |
Product | predicted protein |
Protein accession | XP_001383521 |
Protein GI | 126133993 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.407472 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0307188 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTACCG AAAAGATTTC TTTCTTGCTT AATTGGCAGC CAACTCCATA CCATATTCCT ATCTATATTG CCCAAACCAA GGGCTACTTC AAGGAACAAG GTATTGATGT TTCAATCTTG GAGCCATCCA ACCCTTCTGA TGTTACTGAG CTCATTGGTT CTGGAAAAAT TGACATGGGA TTGAAGGCTA TGGTTCACAC TTTGGCTGCA AAAGCCAGAG GTTTCCCTGT CACATCAATT GGTTCCTTGT TAGACGAACC ATTCACTGGG GTCTTGTATT TGGAAGGTTC TGGAATCACT GCAGACTTCC AATCTTTGAA AGGAAAGAGA ATTGGCTACG TTGGTGAGTT TGGCAAGATC CAAATCGACG AATTGACCAA ACACTACGGA ATGACTCCAG AAGACTATAC CGCTGTGAGA TGTGGCATGA ATGTAGCTAA GTACATTATC GAAGGTTCCA TCGATGCTGG TATTGGTATT GAATGTATTC AGCAAGTCGA ATTGGAAGAC TATCTAAGAA AACAAGGAAG GCCAATTTCT GATGCTAAGA TGTTGAGAAT CGACAAGTTG GCTGAACTTG GGTGCTGTTG TTTCTGTACT ATCTTGTACA TTGCAAATGA CAACTTCTTA AAAGAGAACC CTGAAAAGAT TAGAAAGTTT TTGAAGGCGG TGAAGAATGC TACCGACTTT GTTCTCACTA ACCCCAAGCA GGCTTGGGAG GAGTACAGCG ACTTCAAGCC GCAGATGACT TCGGAATTGA ACAACAAAAT GTTCGAAAGA TGTTTCGCCT ACTTCTCAGA CTCATTGTAC AATGTACATC GTGACTGGAA GAAGGTAACT GCCTATGGTA AGAGATTGGA TATCATTCCT CAGGATTTCC AGTCCAACTA TTCGAACGAG TACTTGTCTT GGCCAGAACC AAAGGAAGCT GAGGACCCAT TGGAAGTTCA AAGGAAGATG GCTGTTCACC AGGATGAATG TAAAGCTTGT GGAGGTTACA GAAGATTGGT TCTTTCGTAG
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Protein sequence | MSTEKISFLL NWQPTPYHIP IYIAQTKGYF KEQGIDVSIL EPSNPSDVTE LIGSGKIDMG LKAMVHTLAA KARGFPVTSI GSLLDEPFTG VLYLEGSGIT ADFQSLKGKR IGYVGEFGKI QIDELTKHYG MTPEDYTAVR CGMNVAKYII EGSIDAGIGI ECIQQVELED YLRKQGRPIS DAKMLRIDKL AELGCCCFCT ILYIANDNFL KENPEKIRKF LKAVKNATDF VLTNPKQAWE EYSDFKPQMT SELNNKMFER CFAYFSDSLY NVHRDWKKVT AYGKRLDIIP QDFQSNYSNE YLSWPEPKEA EDPLEVQRKM AVHQDECKAC GGYRRLVLS
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