Gene PICST_30900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_30900 
Symbol 
ID4838256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp1227283 
End bp1228632 
Gene Length1350 bp 
Protein Length449 aa 
Translation table12 
GC content42% 
IMG OID640389571 
Productpredicted protein 
Protein accessionXP_001383865 
Protein GI150864869 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1275] Tellurite resistance protein and related permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.192917 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.324549 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGAGT TACAGCATAA AGATTTGGAG CTGCAAAGCT TTCCCTCTCT GAACAAAGAC 
GTAGCAGACT TGGAAGAAAA CGAAAATATA GACAACGAAG TCAATGTAGA AGACGGAGAC
TCTTCAACAC CTTCAGGTAC TCCGATTAAA TATGGCCAGA CAACAGTACA GAAGCCATTC
CTCACCAGAT TAAGAGAACT CCTCTTTCGC GAGCTCATAG AAAAATTCGT TCCAGCATAT
TTCGCAACCA TTTTGGGTCT TGGAATAACT GCCGTGATGT GCTCCCTTTT TCCATATCCA
GCGAACTGGC TCCAGATTAT TGGCAAAATT GTGTTCGGTA CGAATGTACT CGTGTTTCTA
GTCTTAACTT TCAGTTGTCT AATTGGCTTC TATTACTACC CATCAAGAAT AGTCGAATAC
CACGTTCATC CGTTGCACTC AGTTTTTATG TCCACCTACG TTATGGGCTA TATTGTTATA
GTCAACTTCA TTCGTTTGCT TGTTGGTTCC CATCACAGTA TGCTTCTCTG GGTGTTATGG
TGGATTGCTG TATTCATGTC TGTCTATTGT AGTCTTGTCA TATACTTTTT TGGGACGTTC
TCCAAGTTGA ATAAACCTAC AAAACTTGAA CATATGCACT CGGTTTCTTT GTTACCGGTT
GTTACTTTGG CAGTGGCGTC TTCCAGTGGA CATCTCATAT CAATGTCGTT GCCTTCATTG
AACCATTTTG TCATTACAGA GGTGTGCAGC TTTCTACTTT GGGGTATTTG TGTAGGTATG
GGTGTTTCCT TTATGCCCAT CTACCTTGCC AGAATAATGA TCCACAGAAT TCCGAATACT
GCGCTTATTT TAACTAATCT CTTGCCCATA GGTCTTCTTG GACAAACATC GTACAGTCTT
TTCCTTTTTG GGGTTAACAT GTATGAACGT ATCCCCGACA AAGTTCTTGG AACCTCGTTC
TTAGTTAGTT GTGCTCTTTT CGCAACTGTT GTTTGTGCAT TTGGCTACTA TATGACATTT
GTAGGGATCT TATCCGTTTT ATCGAAGATC AGACCATTTA CCAAGAAACC AAATCCCCAG
TTCACTCATC CAAAGTATGG CCACATTATG TGGAACAAAG GGTTCTGGGC CGTTAATTTC
CCTCTCGGAA CAATGTCTTT GGCCAGTACC GAAATTGGTA AAGGAGTTGT AGGAAATTAC
CCGCTCAAAT TCTTCACGGT TGTCGCTTGC ATGTATTCGG TGACATTATT CCTTTTCACC
ATCTACAACG TCATGGGGGT TCTCGCCTAC TGGTACGACT TGGCTGTCGA ACTTTTCAAC
CCCGAGACAG AAGAACTAAA GACAGCTTAG
 
Protein sequence
MSELQHKDLE SQSFPSSNKD VADLEENENI DNEVNVEDGD SSTPSGTPIK YGQTTVQKPF 
LTRLRELLFR ELIEKFVPAY FATILGLGIT AVMCSLFPYP ANWLQIIGKI VFGTNVLVFL
VLTFSCLIGF YYYPSRIVEY HVHPLHSVFM STYVMGYIVI VNFIRLLVGS HHSMLLWVLW
WIAVFMSVYC SLVIYFFGTF SKLNKPTKLE HMHSVSLLPV VTLAVASSSG HLISMSLPSL
NHFVITEVCS FLLWGICVGM GVSFMPIYLA RIMIHRIPNT ALILTNLLPI GLLGQTSYSL
FLFGVNMYER IPDKVLGTSF LVSCALFATV VCAFGYYMTF VGILSVLSKI RPFTKKPNPQ
FTHPKYGHIM WNKGFWAVNF PLGTMSLAST EIGKGVVGNY PLKFFTVVAC MYSVTLFLFT
IYNVMGVLAY WYDLAVELFN PETEELKTA