| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_30877 |
|---|
| Symbol | |
|---|
| ID | 4838244 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009043 |
|---|
| Strand | - |
|---|
| Start bp | 1171442 |
|---|
| End bp | 1171792 |
|---|
| Gene Length | 351 bp |
|---|
| Protein Length | 116 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640389559 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001383852 |
|---|
| Protein GI | 150864858 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2329] Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.216922 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTTTA TAGCTGAGAC GCCGGAGCCT CCTTACTACG TAGTCACTTT CACAGAGATC
TTCAAGCCAG GCTTGGATCC TACAAAGTAC CGGGCATTAG GCACAGAAAT AGCAAAACTT
GCCCAAAAAC TGCCTGGCTA TTTGGGTATG GAAAGCGTTT CTAACGACAA AGGAGAGGGA
ATCACGTTGA GCTACTGGAC AGACCGTATT AGTATAGTCA ACTGGAAGAA GAACTCGGAA
CACCTTCTTG CTCAGAAAGC CGGCCGCAAC GAGTTCTATT CGAACTATAC CACTAGAGTA
GCCAAGGTTG AAAAACTGTA CACATTAGAG TCTTCCACTT TCAAGGATTA A
|
|---|
| Protein sequence | MSFIAETPEP PYYVVTFTEI FKPGLDPTKY RALGTEIAKL AQKSPGYLGM ESVSNDKGEG
ITLSYWTDRI SIVNWKKNSE HLLAQKAGRN EFYSNYTTRV AKVEKSYTLE SSTFKD
|
|---|
| |