Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_30726 |
Symbol | |
ID | 4837993 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | - |
Start bp | 783667 |
End bp | 784565 |
Gene Length | 899 bp |
Protein Length | 259 aa |
Translation table | 12 |
GC content | 44% |
IMG OID | 640389308 |
Product | predicted protein |
Protein accession | XP_001383786 |
Protein GI | 150864809 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAATT CTCTTTTTCT ACAATTCCTA TCTTTCAAGA GTCTCAACAC CAAGTCTGAC CTACAGAAGT TAGTCGTCTG GATAGTGAAG AAATACCGAC AATAGCTTAT CAACAGCTGA ATCGTGATTA TTCCTATAGT CTGCCATAGT GTATACTAAT CTGTACACTA GTGAATCCAT ATTCTAGTAT CACTATAATG AGCTCCAATG ACGACAACGA AAGCATTGAC CCCAGATTGC GGGATCTTGT GCTAGGAACC GAGTCTTTGA CCTATGGAGA CGACGTCTTT CACGACGCTC CTGAACCAGC AATTGAAAAC CACGAGTCTC CTCAGTTGAA CAATGAAGAA GAACGGGTGC AAAATGAAGA ACCAAATCCT GTTCCTCCAG CCAACTTGGT GCAAATGCCA CTAAATACCA TAGGAGCTGA CGGGAAACCA GTCTATATAA CCCCTGGAAG AGTTACTTTA CTAAAAGACG ATTCCGGCAA CAGCTACTTA TTGCATCCCA ATGGATTTGT TTCTCCAGTA AATGCACCCA AAAGGAAGTC TGAACGAAAT AAACGGAAGA GGAAAGTCCC GCCGTTTTTC CATATGCCTA CACCCATTAC CAAAAACACC ACAGCGGAAG AACTTCTCCG TTGCCATACA AATGTGTTGG AATTGGTGCA ATTCAGTGAG ATTATGAATA AAGAAACATC TAGCAGGTAT GGTGATCTTG ATACTTCTTC TACTGTTCTT CACAGCGCAA CAAATAGCTC CAAAAGTAGT ACCAGAAGCA GCACCCGAAA CCAACTTCTG AACAATAACA GCGTCAAGTC AGACCAGAAG AAACCACGTC TGGCTCAACA GCCTCCGCCT GGCCCTGGAT CCGGTTCCGT CCCTGGCTTT CAAAGTTAA
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Protein sequence | MANSLFLQFL SFKSLNTKSD LQNITIMSSN DDNESIDPRL RDLVLGTESL TYGDDVFHDA PEPAIENHES PQLNNEEERV QNEEPNPVPP ANLVQMPLNT IGADGKPVYI TPGRVTLLKD DSGNSYLLHP NGFVSPVNAP KRKSERNKRK RKVPPFFHMP TPITKNTTAE ELLRCHTNVL ELVQFSEIMN KETSSRYGDL DTSSTVLHSA TNSSKSSTRS STRNQLSNNN SVKSDQKKPR SAQQPPPGPG SGSVPGFQS
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