Gene PICST_30726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_30726 
Symbol 
ID4837993 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp783667 
End bp784565 
Gene Length899 bp 
Protein Length259 aa 
Translation table12 
GC content44% 
IMG OID640389308 
Productpredicted protein 
Protein accessionXP_001383786 
Protein GI150864809 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAATT CTCTTTTTCT ACAATTCCTA TCTTTCAAGA GTCTCAACAC CAAGTCTGAC 
CTACAGAAGT TAGTCGTCTG GATAGTGAAG AAATACCGAC AATAGCTTAT CAACAGCTGA
ATCGTGATTA TTCCTATAGT CTGCCATAGT GTATACTAAT CTGTACACTA GTGAATCCAT
ATTCTAGTAT CACTATAATG AGCTCCAATG ACGACAACGA AAGCATTGAC CCCAGATTGC
GGGATCTTGT GCTAGGAACC GAGTCTTTGA CCTATGGAGA CGACGTCTTT CACGACGCTC
CTGAACCAGC AATTGAAAAC CACGAGTCTC CTCAGTTGAA CAATGAAGAA GAACGGGTGC
AAAATGAAGA ACCAAATCCT GTTCCTCCAG CCAACTTGGT GCAAATGCCA CTAAATACCA
TAGGAGCTGA CGGGAAACCA GTCTATATAA CCCCTGGAAG AGTTACTTTA CTAAAAGACG
ATTCCGGCAA CAGCTACTTA TTGCATCCCA ATGGATTTGT TTCTCCAGTA AATGCACCCA
AAAGGAAGTC TGAACGAAAT AAACGGAAGA GGAAAGTCCC GCCGTTTTTC CATATGCCTA
CACCCATTAC CAAAAACACC ACAGCGGAAG AACTTCTCCG TTGCCATACA AATGTGTTGG
AATTGGTGCA ATTCAGTGAG ATTATGAATA AAGAAACATC TAGCAGGTAT GGTGATCTTG
ATACTTCTTC TACTGTTCTT CACAGCGCAA CAAATAGCTC CAAAAGTAGT ACCAGAAGCA
GCACCCGAAA CCAACTTCTG AACAATAACA GCGTCAAGTC AGACCAGAAG AAACCACGTC
TGGCTCAACA GCCTCCGCCT GGCCCTGGAT CCGGTTCCGT CCCTGGCTTT CAAAGTTAA
 
Protein sequence
MANSLFLQFL SFKSLNTKSD LQNITIMSSN DDNESIDPRL RDLVLGTESL TYGDDVFHDA 
PEPAIENHES PQLNNEEERV QNEEPNPVPP ANLVQMPLNT IGADGKPVYI TPGRVTLLKD
DSGNSYLLHP NGFVSPVNAP KRKSERNKRK RKVPPFFHMP TPITKNTTAE ELLRCHTNVL
ELVQFSEIMN KETSSRYGDL DTSSTVLHSA TNSSKSSTRS STRNQLSNNN SVKSDQKKPR
SAQQPPPGPG SGSVPGFQS