Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_30707 |
Symbol | |
ID | 4838307 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | - |
Start bp | 736825 |
End bp | 737991 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640389622 |
Product | predicted protein |
Protein accession | XP_001383773 |
Protein GI | 150864798 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0439015 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.801143 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGGCA AATACGGTAA GCGATACTTG GTTGTCCCCT TGCTACTCAT TCTCTTCCTT GTGTTTACCT CTCACAGCCA CCACCAAAAA TTCGCGAACT TTACAGCTTC TTTAGCAACA CACAAATCCA CAATTAAAGA ACCATACGTC AAAAACATAT TCGTTGACGA AGAATTCAAC TACACCAAGG TCGAATATGT GCTGAATAAC CAAAGAAGCA ATGGTAATAT TCCTGTCAAG AATTCTCCTT TTGATGACCG CAAAACTAGA CCTACAGTTC TCATTGTACT GACCATTGCA CTGAACTCAG GCTACGGGGA AGGAAGAACC TTTGTAGACT TTTTCGATAC CATCTCCACC TTGTATCAAC ATGACACACA CGACATCTCG CTTGCTTTCC TCATTAACAG TGCATCCGAA TTCAGTAAGG TTGAGACAAT TTTCAACACG AACTCTTCTA TCTACGAGAA TCCAGCACTT CGAAAAGTTA CACTTTTGCT GGCTCCGTTC CTTGAGGAAA ACTCAGGATT TTCCAGAGAT CAAAGACACA ACGACAATGT TCAACGCTTG CGCCGTCGTT TAATTGCCAG AGCCCGTAAT TTCGTTCTAT ACACTGCTTT ACACCAAGAA CAGTACACCT TGTTTCTTGA TGCTGATATC ATCAAGTTGG ACCATTCCGA TAAAGTCATA TCCACATTTA TCAACTCCAA GAAAGACATT ATTGTTCCCC GTATCATTCG TGATGGCAAC CAAGATTATG ATAAAAATTC CTGGAGAGGA CAACGTACAA AGCCAGACGA AAATCAGCTC GAAAAGATGG ATGATGATAG ATGGGAACAA TGGGATTACG TTCCTCGTGA TGTTCCAGGA AAAATGTACC ATTTCCAAAA CTATGTAGAC AACAAGAACA ATGAAAGAGA ACAGCATCTA CATGAATTCG AATATGCTGT ACCCTTGGAC TCCGTCGGTG GAGCAGTCTT GTTTGCCAAA TCTGTCATCT ACAAACAGGG CGTCGTATTC CCTACCAACT ACATCATCGG TACTTCCTGG GATAGATCTG AAGGTTACGA TGGTATCGAG ACAGAAGGTG TATGCTATAT CGCCAAACCG TTGGGATATC TCTGTTGGGG TTATCCAAAT ATTTTGGCAT ATCATTCCAG TAATTAA
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Protein sequence | MRGKYGKRYL VVPLLLILFL VFTSHSHHQK FANFTASLAT HKSTIKEPYV KNIFVDEEFN YTKVEYVSNN QRSNGNIPVK NSPFDDRKTR PTVLIVSTIA SNSGYGEGRT FVDFFDTIST LYQHDTHDIS LAFLINSASE FSKVETIFNT NSSIYENPAL RKVTLLSAPF LEENSGFSRD QRHNDNVQRL RRRLIARARN FVLYTALHQE QYTLFLDADI IKLDHSDKVI STFINSKKDI IVPRIIRDGN QDYDKNSWRG QRTKPDENQL EKMDDDRWEQ WDYVPRDVPG KMYHFQNYVD NKNNEREQHL HEFEYAVPLD SVGGAVLFAK SVIYKQGVVF PTNYIIGTSW DRSEGYDGIE TEGVCYIAKP LGYLCWGYPN ILAYHSSN
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