Gene PICST_30667 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_30667 
Symbol 
ID4838357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp634717 
End bp635271 
Gene Length555 bp 
Protein Length184 aa 
Translation table12 
GC content43% 
IMG OID640389672 
Productpredicted protein 
Protein accessionXP_001383403 
Protein GI150864544 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.88289 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.188715 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGCCT CTACCCTTGA CTCCTCAATT GCCCCTCTGC TTCCTACTGC TCCCAAACCG 
GTACCAGTAT TTACTTTCAA CTTAAAACTT GCCGGTGAGC CTAGCCTGAT ATTTGTCTCA
AAAGAGCAAG ACAAGGCTTT GTCTTTAGCT ACAATTGCTG ATGGTGAAAT CAGAACTGTT
GAAAACGAGT TAGGTTTGGA ATTCGACGTC AGTGGTATCA CAGGATTTGA CGACTTGAAT
GCGAGACCTT CAGTCAATGC TGCAACCTTG GATTGTAAGT TGTATGGTAA GACTGGATCG
GGAGCTGGTG TCTACGTCAG ATATGGAGGT GTGGTTCAGT TTTTGGAACC ATCTCTTCTA
GTCATGTCAA ACCAAAAGCC AACTTCGGAG TTCGATGAAT CGTACGTCAC CTGCAACCCA
ACCTTCACCT TCGATCTGAA TGTTGAAGAA AAATATCAAT GGGTCTTGAG AGAGAATTTC
TTTGGTAAGG GACGTTTTGT TAGAGACTCT GCTGGTGTTC TTCACGTTCA ATACTTTATA
TACGTTTTCC GTTAA
 
Protein sequence
MVASTLDSSI APSLPTAPKP VPVFTFNLKL AGEPSSIFVS KEQDKALSLA TIADGEIRTV 
ENELGLEFDV SGITGFDDLN ARPSVNAATL DCKLYGKTGS GAGVYVRYGG VVQFLEPSLL
VMSNQKPTSE FDESYVTCNP TFTFDSNVEE KYQWVLRENF FGKGRFVRDS AGVLHVQYFI
YVFR