Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_30667 |
Symbol | |
ID | 4838357 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | + |
Start bp | 634717 |
End bp | 635271 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 12 |
GC content | 43% |
IMG OID | 640389672 |
Product | predicted protein |
Protein accession | XP_001383403 |
Protein GI | 150864544 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.88289 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.188715 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCGCCT CTACCCTTGA CTCCTCAATT GCCCCTCTGC TTCCTACTGC TCCCAAACCG GTACCAGTAT TTACTTTCAA CTTAAAACTT GCCGGTGAGC CTAGCCTGAT ATTTGTCTCA AAAGAGCAAG ACAAGGCTTT GTCTTTAGCT ACAATTGCTG ATGGTGAAAT CAGAACTGTT GAAAACGAGT TAGGTTTGGA ATTCGACGTC AGTGGTATCA CAGGATTTGA CGACTTGAAT GCGAGACCTT CAGTCAATGC TGCAACCTTG GATTGTAAGT TGTATGGTAA GACTGGATCG GGAGCTGGTG TCTACGTCAG ATATGGAGGT GTGGTTCAGT TTTTGGAACC ATCTCTTCTA GTCATGTCAA ACCAAAAGCC AACTTCGGAG TTCGATGAAT CGTACGTCAC CTGCAACCCA ACCTTCACCT TCGATCTGAA TGTTGAAGAA AAATATCAAT GGGTCTTGAG AGAGAATTTC TTTGGTAAGG GACGTTTTGT TAGAGACTCT GCTGGTGTTC TTCACGTTCA ATACTTTATA TACGTTTTCC GTTAA
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Protein sequence | MVASTLDSSI APSLPTAPKP VPVFTFNLKL AGEPSSIFVS KEQDKALSLA TIADGEIRTV ENELGLEFDV SGITGFDDLN ARPSVNAATL DCKLYGKTGS GAGVYVRYGG VVQFLEPSLL VMSNQKPTSE FDESYVTCNP TFTFDSNVEE KYQWVLRENF FGKGRFVRDS AGVLHVQYFI YVFR
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