Gene PICST_30495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_30495 
Symbol 
ID4837743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp210344 
End bp210907 
Gene Length564 bp 
Protein Length187 aa 
Translation table12 
GC content43% 
IMG OID640389058 
Productpredicted protein 
Protein accessionXP_001383668 
Protein GI126134287 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0621124 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAAAA GCGCCATGCA CAGAAGCGTG GGTGTGATAC CTCGCTCTTT GGCTATTACT 
TCGTTCAACA AGCAGTTCGT GGGTGCTCCT GTAGCACTTG TTCGTTACAA TTCTTCATTT
GATCAATTGA AAAATTCCAA GGCTAACCAA AAAAGCTCCA ACTCAAAAAA GAACAATAAC
GGCATTAATG ACATAAACGA GTTATTGAAC TCGTCGTTGG AGCTTTCTGA AAATTCTGCA
TTTTTACATT CCAAGTCCAG CGACTATGGT TTGGGAGACG TTGTTCCAAA CCCAAGAGAT
GTAGCCAAAA ACATCAGAGA AATGGGTCCA GTTGCTGGTA GAGCTGTAGA TGTTCACTAC
GGTGGATTGG GCAAGGCATT CGCCGGAGTG AGAAGACTCG GGTTCACCAA CAAAATAAAG
CATTACCAAA AGGTGCAGGA GAGATACATC CGTCCAGCCA AGTATGCTAA GCAGAAGAAG
AGAGAATGGT GGAGAAGAAA GTTCTCCGAA GGGTTCAAGG ACTTGATGTC GCAAGTGAAC
GATGCCAGAA GAAGAGGATA TTAA
 
Protein sequence
MFKSAMHRSV GVIPRSLAIT SFNKQFVGAP VALVRYNSSF DQLKNSKANQ KSSNSKKNNN 
GINDINELLN SSLELSENSA FLHSKSSDYG LGDVVPNPRD VAKNIREMGP VAGRAVDVHY
GGLGKAFAGV RRLGFTNKIK HYQKVQERYI RPAKYAKQKK REWWRRKFSE GFKDLMSQVN
DARRRGY