Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_30195 |
Symbol | MUC1.3 |
ID | 4837107 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | + |
Start bp | 2202147 |
End bp | 2204585 |
Gene Length | 2439 bp |
Protein Length | 812 aa |
Translation table | 12 |
GC content | 49% |
IMG OID | 640388422 |
Product | hypothetical protein, likely cell wall localized and GPI-anchored mucin like |
Protein accession | XP_001382648 |
Protein GI | 150863986 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.322783 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTATC TTCTTCCATT GGTCCAATTG ACTTGGATGT TGGCTGGAGC TTCTTGCTCA ACCTTCTATT CTAACTCCTC TTCTTCAGAA TTTCCAACTA TTTCTGTAAG TTCAGTATCT TCATTATTGT CATCGTCTGC CGAGTTGAGT TCGTACGTAA ACTCGCTGTC CATCATCAGT GAATCCTCCA CCGGAGAAAC TAGTATTTTG AGTTCAATTG CATCGTCTAC TGAAGAATCC ACTATCGAGA CTTCTAACGG ACCATCTACT GAAGAGTCCA CTGTTGAAAC TTCAGTTGGA CCAACCTCAG AAACTTCCCA GACTGGCGCT GAGTCGTCTC CAGTTGTCTC TACTTCTGAA TCTACTATTA CCAGTTCTCC AAGTGGTACT CCTATTCCAC CATTAACTGC TGACACTCCT TTCATTTTGA CTGCTTTGAT CGATGGTATT GCTGCTATCG TTGAAGCCCT TTTGGTTGAC ATCGAAAATG GCACTTTGCG TAAGAGACTT GAGACCTACA TTTTGGGTTT CAACCTTGGC GGTGCCGATG TTGTCTTCAA CCTTGACCCA GATACCAGTT TCCTTTCTTC AAACAATGGT TTGTACGTTC AAGCTCCTGA TCCACAATTG GGTGTTTACC TTGGTGCATC CCCTGTTGCC GGATGGGGCT ACACTCCAGA CGGACAATTG AGTTTCAATG GAGTTTCTGC TTTCTTCAGT TGTCCATATG GTGACAACGG TGGTTCCATC CTTACTACAG TGGACACCGG AAACTGTAGT GGTTTGCAAT TGGGTATCGT TGTTCAAGAG AATCCTACCT CTTCTTCTTC TGAAAGCGAA ACTTCTGGAA CATCAAGTGA GGCATCTTCG GGTGCTGAGT CTTCTGGAGC TTCTACCGCT GAGACTTCTG GTGCTTCTAG TGCTGAAACC TCTGGTGCTT CTAGTGCTGA AACCTCTGGT GCTTCTAGTG CTGTTACTTC TGGTGCTTCT AGTGCTGTAA CCTCTGGTGC CTCCAGTGCT GTAACCTCCG GTGCCTCCAG TGCTGTGACT TCTGGTGCCT CCAGTGCTGT AACCTCTGGT GCTTCTAGTG CTGTAACCTC TGGTGCTTCT AGTGCAGTGA CTTCTGGTGC TTCTAGTGCT GTGACTTCTG GTGCTTCTAG TGCTGTAACC TCTGGTGCTA GTTCTCTCCC ATCTGGTATC ACATCTGCTG GTTCATCTGG CGTTACCTCT GGTGCTTCAT CTGCACCAAC CTCTGGTACT CCTTCTTCTG CTGAGAGTTC AGGTGCCTCC AAGACTACTT CTTATACCTT CCAATTGACT GCCATTGCTG CACCTCCAAA CGATTTCAGC GAATTGCTTC TCGACAATGG TGCCAGATTG ATCTTGGATC CTACCAATGG TGCCGAATTC GAATTATCCC TTCCAGGTGG TTTCCTTAAA GTAGGTGACT TGTTCGTCCA CGCTGACGCT TCTGGTTTCT ACCTTAGTTC TGAAACCTTC GGTGGTTTCT CCTTCATTGG CGACCCTCTT TTGGAATTGA ACGGTCAATC TGACTTCTAC ATTTGCCCAA CTTTGGATGT TCCATTGCAA CTTACCAAGG TTGACCCAAG CTGTATGCTC GGCTCCTTGT CGTTAGTCTT GGAACCAGCT ACTTCCTCCA CTGGTTCCAC TGGTACTTCC ACTGGTTCCA CTGGTGCTAC TACTGGTGCT ACTACTGGTG CTACTACTGG TGCTACTACT GGCGCAGCTG GTACTTCCAC TGGTGGTGCT GGTGCCTCTA CTGGTGCATC ACTGTTGACT ACCGCCACTA TCACCACCAA CACTGTTGTT ACTATCACTG AATGCCCAAG CACTGTTACT AACTGTCCTC TCAACTACCG TAAGACTGTC ACTATTCCAA AGACTATTGT AACTACTTAC TGTCCACTTA CTGAAGGCAC CTACGTTGTT GAATCTACCT CGTTGGAAGT TATCACTATT ACCAAATGTC CTGCTACAGT TACTAACTGT CCTCTTAATT CTATTCAAAC ATATACTGTT GCTCACACCA TTAAGTCTAC CGGTGTTACT CCAATTGCTC CTGGTGCCAC TGCTGCTCCA GGCGCTCCAG GCGCTGCTGC TCCAGGTGCT GCTGCTCCAG GTGCTGCTGC TCCAGGTGCT GCTGCTCCAG GTGCTCCAGG TGCTCCAGGT GCTCCAGGTG CTCCAGGTGC TGCTGCTACC CCAGGTGCTC CAGGTGCTGC TGCTACCCCA GGTGCTCCAG GTGCTCCAGG TGCTGCTGTT ACCCCAGGTG CTCCAGGTGC TCCAGGTGCT ACTGTTGCTG AACAAGCTAC TGGTGCTGCT ACCGCTTCCT TCTCTGTGTT CACTTACGAA GCTGCTGCTG GTAAGGCCAC TGGAACTATC GGTACCTTCA TGTTAATGTT GGTTGCCCTC CTCATGTAA
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Protein sequence | MKYLLPLVQL TWMLAGASCS TFYSNSSSSE FPTISVSSVS SLLSSSAELS SYVNSSSIIS ESSTGETSIL SSIASSTEES TIETSNGPST EESTVETSVG PTSETSQTGA ESSPVVSTSE STITSSPSGT PIPPLTADTP FILTALIDGI AAIVEALLVD IENGTLRKRL ETYILGFNLG GADVVFNLDP DTSFLSSNNG LYVQAPDPQL GVYLGASPVA GWGYTPDGQL SFNGVSAFFS CPYGDNGGSI LTTVDTGNCS GLQLGIVVQE NPTSSSSESE TSGTSSEASS GAESSGASTA ETSGASSAET SGASSAETSG ASSAVTSGAS SAVTSGASSA VTSGASSAVT SGASSAVTSG ASSAVTSGAS SAVTSGASSA VTSGASSAVT SGASSLPSGI TSAGSSGVTS GASSAPTSGT PSSAESSGAS KTTSYTFQLT AIAAPPNDFS ELLLDNGARL ILDPTNGAEF ELSLPGGFLK VGDLFVHADA SGFYLSSETF GGFSFIGDPL LELNGQSDFY ICPTLDVPLQ LTKVDPSCML GSLSLVLEPA TSSTGSTGTS TGSTGATTGA TTGATTGATT GAAGTSTGGA GASTGASSLT TATITTNTVV TITECPSTVT NCPLNYRKTV TIPKTIVTTY CPLTEGTYVV ESTSLEVITI TKCPATVTNC PLNSIQTYTV AHTIKSTGVT PIAPGATAAP GAPGAAAPGA AAPGAAAPGA AAPGAPGAPG APGAPGAAAT PGAPGAAATP GAPGAPGAAV TPGAPGAPGA TVAEQATGAA TASFSVFTYE AAAGKATGTI GTFMLMLVAL LM
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