Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_29811 |
Symbol | |
ID | 4837553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | + |
Start bp | 1239009 |
End bp | 1240448 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 12 |
GC content | 46% |
IMG OID | 640388868 |
Product | predicted protein |
Protein accession | XP_001382455 |
Protein GI | 126131860 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGAAT CAGAAAACCT ATTGCTCAGC GAAGCCTCGG CTCCAGCCGT TGAAAATTCG GCCATACCAC CAATCGCAGA TGAAGAAGTT GTCCGTCCAG GCTATTTGCC AAAAGACAAG ATTGAATGGG AATTTGGCGG TCCAGTTGGT GCCTTGGGCA TGATGGGAGG CTTTCCTCTT CTCATGTGGT ACATGTGGAT CTCAGCCCAG TTCTACAATG GGTACCCAGC TTGGCCAAGC GAGGGCCAGG AATGGTCCGA CTTCCTTGGT GATCTCTTCG GCTATTTCTA TGAATACGGA CTTCCCACTT TTGGCGTCTG GTTCTTCTTC ACTACTTTCA TCTTAGTCCA GGCATTGTTC TACTTGACAT TGCCAGGTGT CTGGACCAAG GGTCAGCCGT TGACCCACTT GAACAATAAG CAGTTGCCCT ACTTCTGTAA CGCCATCTGG TCGTTCTACA CTTCGATAGT TCTTGCCTTA GTTATGCACT TCACTGGCTT CTTCAAGCTC ACCTATGTCT TGGACAACTT TGGAGCCATC ATGACTACGG CCATCGTATA CGGGATCGTC CTTTCCATCG CATTGTACAT CGTTTGTGTC TACGTCACTG GTGACTATCA CAGAATGTCT GGCAATGTCG TTTATGACAT CTTCATGGGT GCTCCATTGA ACCCCAGAAT AGGCAAGTAC TTAGATCTCA AGATGTTCTT TGAAGTCAGA ATCCCCTGGT TCATCTTGTT CTTCTTGTCA TTATCTTTGT GTATCAAACA GTACGAGACA TACGGATATG TGTCACCCCA AGCTGTGTTC GTCTTGTATG CCCATTGGTT GTACAGCAAT GCCTGTGCCA AAGGAGAAGA GTTGATCGTT CCTACTTGGG ATATGGCCTA CGAGAAGTTT GGCTTCATGT TACTATTCTG GAACATTGCT GGAGTTCCAT TCACTTACTG TCACTGTACG TTATACTTGG CCTACCACGA TCCAAAGGAG TACGAAGCAT CACCTGTTTG GGTTGCATTC TTGTTTATTC TCTTGTCAGT AGCCTATTAT TTCTTCGATA CTGGTAATCG TCAAAAAAAC AGTTTCAGAA GACAAATGGC AGGCAACGCT ACTCTTCGTA AAACGTTCCC ATACTTACCC TACTCTGACT TGGTCAATCC AAAGTACATT AAATGTGAAA ACGGCTCTCT CTTGTTAACT GACGGTTGGT ACGTCTATGC TAGAAAGATG CACTACACTG CTGACTACAC TCAAGCATTG ACATGGGGCT TGATCTGCGG ATTTAAGTCG CCATTCCCTT GGTTTTTCCC TGTCTTCTTC TTGATAGTAT TGGTCCACAG AGCCTATAGA GACCAGAGAA AATGTGCCAG AAAGTACGGC AAGGACTGGG ACAGATACTT AGAAGCCTGC CCATATATGT TCATTCCATA TGTGTGGTAG
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Protein sequence | MSESENLLLS EASAPAVENS AIPPIADEEV VRPGYLPKDK IEWEFGGPVG ALGMMGGFPL LMWYMWISAQ FYNGYPAWPS EGQEWSDFLG DLFGYFYEYG LPTFGVWFFF TTFILVQALF YLTLPGVWTK GQPLTHLNNK QLPYFCNAIW SFYTSIVLAL VMHFTGFFKL TYVLDNFGAI MTTAIVYGIV LSIALYIVCV YVTGDYHRMS GNVVYDIFMG APLNPRIGKY LDLKMFFEVR IPWFILFFLS LSLCIKQYET YGYVSPQAVF VLYAHWLYSN ACAKGEELIV PTWDMAYEKF GFMLLFWNIA GVPFTYCHCT LYLAYHDPKE YEASPVWVAF LFILLSVAYY FFDTGNRQKN SFRRQMAGNA TLRKTFPYLP YSDLVNPKYI KCENGSLLLT DGWYVYARKM HYTADYTQAL TWGLICGFKS PFPWFFPVFF LIVLVHRAYR DQRKCARKYG KDWDRYLEAC PYMFIPYVW
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