Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_29791 |
Symbol | |
ID | 4836935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | - |
Start bp | 1176015 |
End bp | 1176587 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 12 |
GC content | 39% |
IMG OID | 640388250 |
Product | predicted protein |
Protein accession | XP_001383002 |
Protein GI | 150864258 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.294319 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTTCA AGTCTACAGC ATCCAAGCAT CAGGCACAGA CTACAGTCAG CAAGCTATTT GCCAATATCT TGCCTAATCA CACTATAGGC AATGATGAAG ACAAACAGGA AAAGTTGTCA TCCACACAGC TTCTTTCCAA CCAGTTGAAG CAACTGTCTG TTCCTTTGAA GAAAGTAAAG AAGAAGACAA ATGCTAAGAT CAAAAAGATA AATGATCTGA ATACCAAGTT CAAGAAGTTT GTTAAATATA ACATCATCAA GAGTCGCGAA GAGCACACAG TAGAAGAACA GAAATACTTG AAGAAGTTGG TGAAGCGGAA TGCATCTCAG ATCAAGAACT TATCCCACAT AGACAACATG CAAATAGAAG AAGAGTTATC CGATGTGCGA GCCAGCTTGA TTGACAAGAT TGGAAAGAAA GAAAATAAGA GACTTAGGAA GAGAAAGTTG ACTTCAGCAA AGAATAGCAA ATTCGATGAC TTTGATAACA AGGTCAAGAG GGGATTCATT TCTGTTCCTG GCTTGACTCC AGGTTTGGCA CCAATAGACT ACAATGAATC CGATTCTGAG TAA
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Protein sequence | MSFKSTASKH QAQTTVSKLF ANILPNHTIG NDEDKQEKLS STQLLSNQLK QSSVPLKKVK KKTNAKIKKI NDSNTKFKKF VKYNIIKSRE EHTVEEQKYL KKLVKRNASQ IKNLSHIDNM QIEEELSDVR ASLIDKIGKK ENKRLRKRKL TSAKNSKFDD FDNKVKRGFI SVPGLTPGLA PIDYNESDSE
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