Gene PICST_29791 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_29791 
Symbol 
ID4836935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp1176015 
End bp1176587 
Gene Length573 bp 
Protein Length190 aa 
Translation table12 
GC content39% 
IMG OID640388250 
Productpredicted protein 
Protein accessionXP_001383002 
Protein GI150864258 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.294319 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTTCA AGTCTACAGC ATCCAAGCAT CAGGCACAGA CTACAGTCAG CAAGCTATTT 
GCCAATATCT TGCCTAATCA CACTATAGGC AATGATGAAG ACAAACAGGA AAAGTTGTCA
TCCACACAGC TTCTTTCCAA CCAGTTGAAG CAACTGTCTG TTCCTTTGAA GAAAGTAAAG
AAGAAGACAA ATGCTAAGAT CAAAAAGATA AATGATCTGA ATACCAAGTT CAAGAAGTTT
GTTAAATATA ACATCATCAA GAGTCGCGAA GAGCACACAG TAGAAGAACA GAAATACTTG
AAGAAGTTGG TGAAGCGGAA TGCATCTCAG ATCAAGAACT TATCCCACAT AGACAACATG
CAAATAGAAG AAGAGTTATC CGATGTGCGA GCCAGCTTGA TTGACAAGAT TGGAAAGAAA
GAAAATAAGA GACTTAGGAA GAGAAAGTTG ACTTCAGCAA AGAATAGCAA ATTCGATGAC
TTTGATAACA AGGTCAAGAG GGGATTCATT TCTGTTCCTG GCTTGACTCC AGGTTTGGCA
CCAATAGACT ACAATGAATC CGATTCTGAG TAA
 
Protein sequence
MSFKSTASKH QAQTTVSKLF ANILPNHTIG NDEDKQEKLS STQLLSNQLK QSSVPLKKVK 
KKTNAKIKKI NDSNTKFKKF VKYNIIKSRE EHTVEEQKYL KKLVKRNASQ IKNLSHIDNM
QIEEELSDVR ASLIDKIGKK ENKRLRKRKL TSAKNSKFDD FDNKVKRGFI SVPGLTPGLA
PIDYNESDSE