Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_29740 |
Symbol | DAL4 |
ID | 4836842 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | + |
Start bp | 1022656 |
End bp | 1024251 |
Gene Length | 1596 bp |
Protein Length | 531 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640388157 |
Product | allantoate permease |
Protein accession | XP_001382424 |
Protein GI | 126131798 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | [TIGR00893] d-galactonate transporter |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.895789 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.954692 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTGGGG ACAAAGAGAA AAATGTCCAT GAGACAAACA TTACTGCTGT TGCCTCATTC ACTCGACAAG ACATTGGCAA GAATGAGAAT GTCATTACCA CAATCATCTC TCCTTTTACC TCACATGAAG TGAAACTTAC TGGCGATGTC GATGAAGCAT TGAAATTTGC CTTGGACCAT TCGGATGCAC AAGTGGTATT GACTCCAGAA AGAGATAGAA AGTTACTTTG GAAGATCGAT TTACACTTGA TGCCTATTTT ATGTTTATTG TACTGTTTCC AGTTCATGGA TAAATTGTCC AATTCCTATG CTTCAGTTTT GGGATTGAGA ACAGACTTGA GCATGCAAGG GGATATGTAT TCGTGGACTG GCTCTGCGTT TTACATCGGC TATTTGGTTT TTGAATTTCC AGCATCCCGA CTCTTGCAGA AGTTCCCAGT GGCAAAGACA CTTTCTATTT TCATCATTCT CTGGGGTATT ATCTTGATGC TCCATGCTAC TCCACAGTAT CCTGGCTTTA TTGCCTTGAG AACTATCTTG GGTATGCTTG AAAGTTCCGT AACTCCAGCT AACCTTCTAA TTACGGGTAG TTTCTACAGA AAGGAAGAAG TATTTCTCCG AGTTGCTTTA TGGTTTTCTA GTAACGGTAT AGGCACAATG CTTGGCTCTG GTGCTATAGC TCATAGCTTG GTCCAGTACG AGGACTCATA TAGTATCGCT CCTTGGAAAC TTACTTTTAT TATAACAGGA GCTTTGACGG TCGTAATTGG ATTCATATTT ATGTTCCATG TTCCAGATAC CCCTGCAAAT GCCTGGTTTC TTAATGAAGA AGAGAAAATG TTGGTTGTCG AAAGAATTAG AGCAAATCAA CAAGGGTTCG GAAACAAGCA CTTCAAGATG CACCAGTTTA AGGAAGCCAT GTTCGACATA AAGACATGGT TGATTGCACT TTTTGCATTT GCTTCCAACA TTCCCAACGG AGGGATTACC AATTTTGGAA GCATTTTGTT AACAGAAGAT CTAGGTTACT CCGTACCTGA AGGTTTGTTG ATGCAAATTC CCGCTGGTGC AGTGGAATTC GTAGGATGCT CACTCTTGGC TTTCGCAGCC AGTTATGTTG CAAAAAAGAG ATTATTCTGG GCCATGGTGG GTACAGTCAT CGCAGTTGTA GGAGAATGCT TTTTAGCATT TAGTAACAAC CATAAGCTCC AACTTGCCGG TTATATCCTC TACTCAATTG CCCCCGTTGG GTTTATCTGT CTCTTATCGA TTATTTCTTC GAATGTTGCT GGGCATACTA AGAAAGTGAC TACAAATGCA ATTTACTTGG TGAGCTACTG TGTTGGGAAT CTTATCGGCC CACAGACTTT CCTAGAAAGA GAGGCTCCCA ACTACAAGAC AGCCAAAATT TGTATTGCTG CCTTTGGAGT GTTTTCTATA GCCATCCTCG GTGCTATCTG GTTTGTATAC TGGTTTGATA ACAGATCACG TGATCGGATG AGTAGTGATG CCGCTGAAGA CTTTGCGCTT ATTGACAACC ACGAATTCGC GGATTTGACC GATAAGGAAA ATCCTTTATT CAGATACGAG TTGTAG
|
Protein sequence | MPGDKEKNVH ETNITAVASF TRQDIGKNEN VITTIISPFT SHEVKLTGDV DEALKFALDH SDAQVVLTPE RDRKLLWKID LHLMPILCLL YCFQFMDKLS NSYASVLGLR TDLSMQGDMY SWTGSAFYIG YLVFEFPASR LLQKFPVAKT LSIFIILWGI ILMLHATPQY PGFIALRTIL GMLESSVTPA NLLITGSFYR KEEVFLRVAL WFSSNGIGTM LGSGAIAHSL VQYEDSYSIA PWKLTFIITG ALTVVIGFIF MFHVPDTPAN AWFLNEEEKM LVVERIRANQ QGFGNKHFKM HQFKEAMFDI KTWLIALFAF ASNIPNGGIT NFGSILLTED LGYSVPEGLL MQIPAGAVEF VGCSLLAFAA SYVAKKRLFW AMVGTVIAVV GECFLAFSNN HKLQLAGYIL YSIAPVGFIC LLSIISSNVA GHTKKVTTNA IYLVSYCVGN LIGPQTFLER EAPNYKTAKI CIAAFGVFSI AILGAIWFVY WFDNRSRDRM SSDAAEDFAL IDNHEFADLT DKENPLFRYE L
|
| |